HL_9T7H_050
3D structure
- PDB id
- 9T7H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- UUUAAUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 9T7H|1|1|A|2036, 9T7H|1|1|A|2037, 9T7H|1|1|U|2038, 9T7H|1|1|A|2042
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9T7H_050 not in the Motif Atlas
- Homologous match to HL_4V9F_047
- Geometric discrepancy: 0.084
- The information below is about HL_4V9F_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.3
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 10
Unit IDs
9T7H|1|1|U|2033
9T7H|1|1|U|2034
9T7H|1|1|U|2035
9T7H|1|1|A|2036
9T7H|1|1|A|2037
9T7H|1|1|U|2038
9T7H|1|1|A|2039
9T7H|1|1|A|2040
9T7H|1|1|A|2041
9T7H|1|1|A|2042
9T7H|1|1|A|2043
Current chains
- Chain 1
- rRNA 23S
Nearby chains
- Chain BB
- Large ribosomal subunit protein uL2
- Chain Be
- Large ribosomal subunit protein eL37
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