HL_9T7H_059
3D structure
- PDB id
- 9T7H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- (4AC)GAAAAGGUAUCG
- Length
- 13 nucleotides
- Bulged bases
- 9T7H|1|1|A|2499, 9T7H|1|1|C|2506
- QA status
- Modified nucleotides: 4AC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9T7H_059 not in the Motif Atlas
- Homologous match to HL_4V9F_056
- Geometric discrepancy: 0.0845
- The information below is about HL_4V9F_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.3
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
9T7H|1|1|4AC|2495
9T7H|1|1|G|2496
9T7H|1|1|A|2497
9T7H|1|1|A|2498
9T7H|1|1|A|2499
9T7H|1|1|A|2500
9T7H|1|1|G|2501
9T7H|1|1|G|2502
9T7H|1|1|U|2503
9T7H|1|1|A|2504
9T7H|1|1|U|2505
9T7H|1|1|C|2506
9T7H|1|1|G|2507
Current chains
- Chain 1
- rRNA 23S
Nearby chains
- Chain BN
- Large ribosomal subunit protein uL16
- Chain BR
- Large ribosomal subunit protein eL21
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