HL_9TEW_079
3D structure
- PDB id
- 9TEW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- DalDro bound to the initiating Escherichia coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGUAAGUUC
- Length
- 9 nucleotides
- Bulged bases
- 9TEW|1|a|U|1955
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TEW_079 not in the Motif Atlas
- Homologous match to HL_7A0S_048
- Geometric discrepancy: 0.1229
- The information below is about HL_7A0S_048
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33350.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9TEW|1|a|G|1949
9TEW|1|a|G|1950
9TEW|1|a|U|1951
9TEW|1|a|A|1952
9TEW|1|a|A|1953
9TEW|1|a|G|1954
9TEW|1|a|U|1955
9TEW|1|a|U|1956
9TEW|1|a|C|1957
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain j
- Large ribosomal subunit protein uL14
Coloring options: