HL_9TEZ_002
3D structure
- PDB id
- 9TEZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- DalDroS bound to the Escherichia coli 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.88 Å
Loop
- Sequence
- UGAUAUGAA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TEZ_002 not in the Motif Atlas
- Geometric match to HL_8B0X_034
- Geometric discrepancy: 0.1364
- The information below is about HL_8B0X_034
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_65821.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9TEZ|1|V|U|87
9TEZ|1|V|G|88
9TEZ|1|V|A|89
9TEZ|1|V|U|90
9TEZ|1|V|A|91
9TEZ|1|V|U|92
9TEZ|1|V|G|93
9TEZ|1|V|A|94
9TEZ|1|V|A|95
Current chains
- Chain V
- 23S rRNA
Nearby chains
- Chain s
- Large ribosomal subunit protein uL23
- Chain t
- Large ribosomal subunit protein uL24
- Chain x
- Large ribosomal subunit protein uL29
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