Motif HL_65821.1 Version HL_65821.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8B0X_034 | 8B0X | 0.0000 | 0 | a | LSU rRNA | U | 87 | G | 88 | A | 89 | U | 90 | A | 91 | U | 92 | G | 93 | A | 94 | A | 95 | cWW |
| 2 | HL_8V1I_005 | 8V1I | 0.5251 | 0 | B | MALAT1-associated small cytoplasmic RNA/MEN beta RNA | U | 22 | G | 23 | G | 24 | U | 25 | U | 26 | U | 27 | C | 28 | C | 29 | A | 30 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGAUAUGAA | 1 |
| UGGUUUCCA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAUAUGA | 1 |
| GGUUUCC | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.53 | Avg 0.26 | Max 0.53
Coloring options: