HL_9TEZ_040

3D structure

PDB id

9TEZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

DalDroS bound to the Escherichia coli 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

9TEZ|1|V|U|1729, 9TEZ|1|V|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TEZ_040 not in the Motif Atlas

Geometric match to HL_2Y9H_005

Geometric discrepancy: 0.3752

The information below is about HL_2Y9H_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_44506.3

Basepair signature

cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

9TEZ|1|V|C|1727
9TEZ|1|V|C|1728
9TEZ|1|V|U|1729
9TEZ|1|V|C|1730
9TEZ|1|V|G|1731
9TEZ|1|V|C|1732
9TEZ|1|V|G|1733

Current chains

Chain V

23S rRNA

Nearby chains