HL_9TI5_027

3D structure

PDB id

9TI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

9TI5|1|A|U|1216, 9TI5|1|A|U|1217

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TI5_027 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.2305

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.5

Basepair signature

cWW-F

Number of instances in this motif group

42

Unit IDs

9TI5|1|A|C|1214
9TI5|1|A|U|1215
9TI5|1|A|U|1216
9TI5|1|A|U|1217
9TI5|1|A|G|1218

Current chains

Chain A

23S rRNA

Nearby chains