HL_9TI6_027
3D structure
- PDB id
- 9TI6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the LSU (postTC-RRF-LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- CUUAGAAGCAG
- Length
- 11 nucleotides
- Bulged bases
- 9TI6|1|A|A|1114
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TI6_027 not in the Motif Atlas
- Homologous match to HL_6PRV_001
- Geometric discrepancy: 0.5613
- The information below is about HL_6PRV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_20174.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9TI6|1|A|C|1108
9TI6|1|A|U|1109
9TI6|1|A|U|1110
9TI6|1|A|A|1111
9TI6|1|A|G|1112
9TI6|1|A|A|1113
9TI6|1|A|A|1114
9TI6|1|A|G|1115
9TI6|1|A|C|1116
9TI6|1|A|A|1117
9TI6|1|A|G|1118
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain C
- Ribosome-recycling factor
- Chain L
- Large ribosomal subunit protein uL11
Coloring options: