HL_9TI6_071
3D structure
- PDB id
- 9TI6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the LSU (postTC-RRF-LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- C(RSP)UGCU(T6A)AG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: RSP, T6A
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TI6_071 not in the Motif Atlas
- Homologous match to HL_9MTS_102
- Geometric discrepancy: 0.1059
- The information below is about HL_9MTS_102
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 44
Unit IDs
9TI6|1|D|C|31
9TI6|1|D|RSP|32
9TI6|1|D|U|33
9TI6|1|D|G|34
9TI6|1|D|C|35
9TI6|1|D|U|36
9TI6|1|D|T6A|37
9TI6|1|D|A|38
9TI6|1|D|G|39
Current chains
- Chain D
- tRNA(Ser3)
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain b
- mRNA
- Chain j
- 30S ribosomal protein S9
Coloring options: