HL_9TI7_057
3D structure
- PDB id
- 9TI7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with E-site tRNA and RRF oriented towards the LSU (postTC-RRF-LSU-2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- AGUUCACAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TI7_057 not in the Motif Atlas
- Homologous match to HL_7A0S_059
- Geometric discrepancy: 0.2126
- The information below is about HL_7A0S_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52011.3
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
9TI7|1|A|A|2498
9TI7|1|A|G|2499
9TI7|1|A|U|2500
9TI7|1|A|U|2501
9TI7|1|A|C|2502
9TI7|1|A|A|2503
9TI7|1|A|C|2504
9TI7|1|A|A|2505
9TI7|1|A|U|2506
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 9
- 50S ribosomal protein L36
- Chain C
- Ribosome-recycling factor
- Chain K
- Large ribosomal subunit protein uL6
- Chain P
- 50S ribosomal protein L16
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