HL_9TI7_087
3D structure
- PDB id
- 9TI7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with E-site tRNA and RRF oriented towards the LSU (postTC-RRF-LSU-2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TI7_087 not in the Motif Atlas
- Homologous match to HL_6CZR_086
- Geometric discrepancy: 0.1286
- The information below is about HL_6CZR_086
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
9TI7|1|a|C|697
9TI7|1|a|G|698
9TI7|1|a|G|699
9TI7|1|a|U|700
9TI7|1|a|G|701
9TI7|1|a|A|702
9TI7|1|a|A|703
9TI7|1|a|A|704
9TI7|1|a|U|705
9TI7|1|a|G|706
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain D
- Transfer RNA; tRNA
- Chain b
- mRNA
- Chain l
- 30S ribosomal protein S11
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