HL_9TI7_089
3D structure
- PDB id
- 9TI7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with E-site tRNA and RRF oriented towards the LSU (postTC-RRF-LSU-2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 9TI7|1|a|U|801
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TI7_089 not in the Motif Atlas
- Homologous match to HL_6CZR_088
- Geometric discrepancy: 0.195
- The information below is about HL_6CZR_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
9TI7|1|a|G|794
9TI7|1|a|A|795
9TI7|1|a|U|796
9TI7|1|a|U|797
9TI7|1|a|A|798
9TI7|1|a|G|799
9TI7|1|a|A|800
9TI7|1|a|U|801
9TI7|1|a|A|802
9TI7|1|a|C|803
9TI7|1|a|C|804
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain D
- Transfer RNA; tRNA
- Chain b
- mRNA
- Chain l
- 30S ribosomal protein S11
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