HL_9TI9_079

3D structure

PDB id

9TI9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome in complex with RRF, EF-G and fusidic acid (70S-RRF-EF-G-FA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

UCUUG

Length

5 nucleotides

Bulged bases

9TI9|1|a|C|219, 9TI9|1|a|U|221

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TI9_079 not in the Motif Atlas

Geometric match to HL_8DP3_002

Geometric discrepancy: 0.1446

The information below is about HL_8DP3_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.5

Basepair signature

cWW-F

Number of instances in this motif group

42

Unit IDs

9TI9|1|a|U|218
9TI9|1|a|C|219
9TI9|1|a|U|220
9TI9|1|a|U|221
9TI9|1|a|G|222

Current chains

Chain a

16S rRNA

Nearby chains