HL_9TKR_040

3D structure

PDB id

9TKR (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S elongation competent complex (70S EC)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TKR_040 not in the Motif Atlas

Homologous match to HL_8B0X_040

Geometric discrepancy: 0.07

The information below is about HL_8B0X_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_76371.5

Basepair signature

cWW-tSH-F-F-F

Number of instances in this motif group

15

Unit IDs

9TKR|1|D2|C|246
9TKR|1|D2|G|247
9TKR|1|D2|G|248
9TKR|1|D2|C|249
9TKR|1|D2|G|250
9TKR|1|D2|A|251
9TKR|1|D2|G|252

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain B8

Large ribosomal subunit protein bL35

Chain BO

Large ribosomal subunit protein uL15