HL_9TKR_048
3D structure
- PDB id
- 9TKR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S elongation competent complex (70S EC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUUUGUAUAA
- Length
- 10 nucleotides
- Bulged bases
- 9TKR|1|D2|A|574
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TKR_048 not in the Motif Atlas
- Homologous match to HL_8B0X_048
- Geometric discrepancy: 0.0956
- The information below is about HL_8B0X_048
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.8
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 142
Unit IDs
9TKR|1|D2|U|566
9TKR|1|D2|U|567
9TKR|1|D2|U|568
9TKR|1|D2|U|569
9TKR|1|D2|G|570
9TKR|1|D2|U|571
9TKR|1|D2|A|572
9TKR|1|D2|U|573
9TKR|1|D2|A|574
9TKR|1|D2|A|575
Current chains
- Chain D2
- 23S Ribosomal RNA
Nearby chains
- Chain B5
- Large ribosomal subunit protein bL32
- Chain BC
- 50S ribosomal protein L3
- Chain BO
- Large ribosomal subunit protein uL15
- Chain BT
- Large ribosomal subunit protein bL20
- Chain BU
- Large ribosomal subunit protein bL21
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