HL_9TKR_063
3D structure
- PDB id
- 9TKR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S elongation competent complex (70S EC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGAAAAGC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TKR_063 not in the Motif Atlas
- Homologous match to HL_8B0X_060
- Geometric discrepancy: 0.0633
- The information below is about HL_8B0X_060
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.8
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 142
Unit IDs
9TKR|1|D2|G|1281
9TKR|1|D2|U|1282
9TKR|1|D2|G|1283
9TKR|1|D2|A|1284
9TKR|1|D2|A|1285
9TKR|1|D2|A|1286
9TKR|1|D2|A|1287
9TKR|1|D2|G|1288
9TKR|1|D2|C|1289
Current chains
- Chain D2
- 23S Ribosomal RNA
Nearby chains
- Chain B5
- Large ribosomal subunit protein bL32
- Chain BQ
- Large ribosomal subunit protein bL17
- Chain BV
- Large ribosomal subunit protein uL22
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