HL_9TNL_037

3D structure

PDB id

9TNL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with A/P- and P/E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.11 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

9TNL|1|a|A|125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TNL_037 not in the Motif Atlas

Homologous match to HL_7A0S_003

Geometric discrepancy: 0.1699

The information below is about HL_7A0S_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_82710.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

5

Unit IDs

9TNL|1|a|G|123
9TNL|1|a|G|124
9TNL|1|a|A|125
9TNL|1|a|A|126
9TNL|1|a|A|127
9TNL|1|a|C|128

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34

Chain s

Large ribosomal subunit protein uL23