HL_9TZ5_005

3D structure

PDB id

9TZ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Triple Stack Doxycycline Bound 50S Subunit of the Coxiella burnetii Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.22 Å

Loop

Sequence

UGAAUUCAUAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TZ5|1|a|U|162
9TZ5|1|a|G|163
9TZ5|1|a|A|164
9TZ5|1|a|A|165
9TZ5|1|a|U|166
9TZ5|1|a|U|167
9TZ5|1|a|C|168
9TZ5|1|a|A|169
9TZ5|1|a|U|170
9TZ5|1|a|A|171
9TZ5|1|a|G|172

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain 9

Large ribosomal subunit protein bL28