HL_9TZ5_026
3D structure
- PDB id
- 9TZ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Triple Stack Doxycycline Bound 50S Subunit of the Coxiella burnetii Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- (PSU)GAUAAGG
- Length
- 8 nucleotides
- Bulged bases
- 9TZ5|1|a|U|964, 9TZ5|1|a|G|967
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TZ5_026 not in the Motif Atlas
- Homologous match to HL_7A0S_026
- Geometric discrepancy: 0.1785
- The information below is about HL_7A0S_026
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.5
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 428
Unit IDs
9TZ5|1|a|PSU|961
9TZ5|1|a|G|962
9TZ5|1|a|A|963
9TZ5|1|a|U|964
9TZ5|1|a|A|965
9TZ5|1|a|A|966
9TZ5|1|a|G|967
9TZ5|1|a|G|968
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain Z
- Coxiellacae Large Subunit Peptide (CLaSP)
- Chain b
- 5S ribosomal RNA; 5S rRNA
- Chain s
- Large ribosomal subunit protein uL16
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