HL_9TZ5_066
3D structure
- PDB id
- 9TZ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Triple Stack Doxycycline Bound 50S Subunit of the Coxiella burnetii Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- GAAGACGAC
- Length
- 9 nucleotides
- Bulged bases
- 9TZ5|1|a|A|2835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TZ5_066 not in the Motif Atlas
- Homologous match to HL_7A0S_067
- Geometric discrepancy: 0.1342
- The information below is about HL_7A0S_067
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_37889.2
- Basepair signature
- cWW-cSW-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
9TZ5|1|a|G|2834
9TZ5|1|a|A|2835
9TZ5|1|a|A|2836
9TZ5|1|a|G|2837
9TZ5|1|a|A|2838
9TZ5|1|a|C|2839
9TZ5|1|a|G|2840
9TZ5|1|a|A|2841
9TZ5|1|a|C|2842
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain c
- Large ribosomal subunit protein bL19
- Chain d
- Large ribosomal subunit protein uL3
- Chain m
- Large ribosomal subunit protein bL17
- Chain v
- Large ribosomal subunit protein bL32
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