HL_9TZ9_052
3D structure
- PDB id
- 9TZ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Empty 50S Subunit of the Coxiella burnetii Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.19 Å
Loop
- Sequence
- CAAAAGAGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 9TZ9|1|a|A|2284, 9TZ9|1|a|C|2291
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TZ9_052 not in the Motif Atlas
- Homologous match to HL_7A0S_053
- Geometric discrepancy: 0.1162
- The information below is about HL_7A0S_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.2
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
9TZ9|1|a|C|2280
9TZ9|1|a|A|2281
9TZ9|1|a|A|2282
9TZ9|1|a|A|2283
9TZ9|1|a|A|2284
9TZ9|1|a|G|2285
9TZ9|1|a|A|2286
9TZ9|1|a|G|2287
9TZ9|1|a|U|2288
9TZ9|1|a|A|2289
9TZ9|1|a|A|2290
9TZ9|1|a|C|2291
9TZ9|1|a|G|2292
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain 8
- Large ribosomal subunit protein bL27
- Chain s
- Large ribosomal subunit protein uL16
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