HL_9TZ9_057

3D structure

PDB id

9TZ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Empty 50S Subunit of the Coxiella burnetii Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

UUUAUGGAAG

Length

10 nucleotides

Bulged bases

9TZ9|1|a|U|2422

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TZ9_057 not in the Motif Atlas

Homologous match to HL_7A0S_058

Geometric discrepancy: 0.1751

The information below is about HL_7A0S_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51853.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

9TZ9|1|a|U|2420
9TZ9|1|a|U|2421
9TZ9|1|a|U|2422
9TZ9|1|a|A|2423
9TZ9|1|a|U|2424
9TZ9|1|a|G|2425
9TZ9|1|a|G|2426
9TZ9|1|a|A|2427
9TZ9|1|a|A|2428
9TZ9|1|a|G|2429

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain k

Large ribosomal subunit protein uL15