HL_9TZE_096
3D structure
- PDB id
- 9TZE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Coxiella burnetii Ribosome with Doxycycline and HPFcold
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 9TZE|1|a|G|2767, 9TZE|1|a|C|2771
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TZE_096 not in the Motif Atlas
- Homologous match to HL_7A0S_065
- Geometric discrepancy: 0.2686
- The information below is about HL_7A0S_065
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53269.3
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 11
Unit IDs
9TZE|1|a|C|2761
9TZE|1|a|U|2762
9TZE|1|a|G|2763
9TZE|1|a|A|2764
9TZE|1|a|A|2765
9TZE|1|a|A|2766
9TZE|1|a|G|2767
9TZE|1|a|C|2768
9TZE|1|a|A|2769
9TZE|1|a|U|2770
9TZE|1|a|C|2771
9TZE|1|a|U|2772
9TZE|1|a|A|2773
9TZE|1|a|A|2774
9TZE|1|a|G|2775
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL36
- Chain g
- Large ribosomal subunit protein uL6
- Chain i
- Large ribosomal subunit protein uL13
Coloring options: