HL_9UWH_014

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUAAAAGCAG

Length

11 nucleotides

Bulged bases

9UWH|1|A|A|2181

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9UWH_014 not in the Motif Atlas

Homologous match to HL_1MMS_003

Geometric discrepancy: 0.1842

The information below is about HL_1MMS_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20174.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

9UWH|1|A|C|2175
9UWH|1|A|C|2176
9UWH|1|A|U|2177
9UWH|1|A|A|2178
9UWH|1|A|A|2179
9UWH|1|A|A|2180
9UWH|1|A|A|2181
9UWH|1|A|G|2182
9UWH|1|A|C|2183
9UWH|1|A|A|2184
9UWH|1|A|G|2185

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain J

Large ribosomal subunit protein uL11m

Chain N

Large ribosomal subunit protein uL16m

Chain l

Large ribosomal subunit protein mL54