HL_9UWH_018

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAAG

Length

4 nucleotides

Bulged bases

9UWH|1|A|A|2401

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9UWH_018 not in the Motif Atlas

Geometric match to HL_7A0S_039

Geometric discrepancy: 0.1087

The information below is about HL_7A0S_039

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

9UWH|1|A|C|2400
9UWH|1|A|A|2401
9UWH|1|A|A|2402
9UWH|1|A|G|2403

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 5

Large ribosomal subunit protein mL37

Chain D

Large ribosomal subunit protein uL2m