HL_9UWH_026

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUG(OMG)GGCGA

Length

9 nucleotides

Bulged bases

9UWH|1|A|G|2814

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9UWH_026 not in the Motif Atlas

Homologous match to HL_7A0S_052

Geometric discrepancy: 0.0976

The information below is about HL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

9UWH|1|A|U|2812
9UWH|1|A|U|2813
9UWH|1|A|G|2814
9UWH|1|A|OMG|2815
9UWH|1|A|G|2816
9UWH|1|A|G|2817
9UWH|1|A|C|2818
9UWH|1|A|G|2819
9UWH|1|A|A|2820

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain Ax

P/P-tRNA

Chain N

Large ribosomal subunit protein uL16m

Chain W

Large ribosomal subunit protein bL27m