HL_9VTH_091
3D structure
- PDB id
- 9VTH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- cryoEM structure of tobacco mosaic virus tRNA-like structure complexed with tobacco 80S and initiator tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CGAAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9VTH_091 not in the Motif Atlas
- Geometric match to HL_5B2P_001
- Geometric discrepancy: 0.1231
- The information below is about HL_5B2P_001
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.7
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 456
Unit IDs
9VTH|1|14|C|2474
9VTH|1|14|G|2475
9VTH|1|14|A|2476
9VTH|1|14|A|2477
9VTH|1|14|A|2478
9VTH|1|14|G|2479
Current chains
- Chain 14
- 25S rRNA
Nearby chains
- Chain LA
- Ribosomal protein
Coloring options: