HL_9VXN_060
3D structure
- PDB id
- 9VXN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.51 Å
Loop
- Sequence
- CGUUCA(PSU)AG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9VXN|1|L5|C|4417
9VXN|1|L5|G|4418
9VXN|1|L5|U|4419
9VXN|1|L5|U|4420
9VXN|1|L5|C|4421
9VXN|1|L5|A|4422
9VXN|1|L5|PSU|4423
9VXN|1|L5|A|4424
9VXN|1|L5|G|4425
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LI
- Ribosomal protein uL16-like
- Chain Lm
- Ubiquitin-ribosomal protein eL40 fusion protein
Coloring options: