HL_9W0N_021
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UGUUGAAAAA
- Length
- 10 nucleotides
- Bulged bases
- 9W0N|1|1|U|747, 9W0N|1|1|A|751, 9W0N|1|1|A|752
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9W0N_021 not in the Motif Atlas
- Homologous match to HL_7A0S_022
- Geometric discrepancy: 0.1902
- The information below is about HL_7A0S_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.3
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 12
Unit IDs
9W0N|1|1|U|744
9W0N|1|1|G|745
9W0N|1|1|U|746
9W0N|1|1|U|747
9W0N|1|1|G|748
9W0N|1|1|A|749
9W0N|1|1|A|750
9W0N|1|1|A|751
9W0N|1|1|A|752
9W0N|1|1|A|753
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain B
- Large ribosomal subunit protein bL32
- Chain D
- Large ribosomal subunit protein bL34
- Chain c
- Large ribosomal subunit protein uL3
- Chain s
- Large ribosomal subunit protein uL22
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