HL_9W0N_044
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UUUAUUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 9W0N|1|1|A|1780, 9W0N|1|1|U|1781, 9W0N|1|1|U|1782, 9W0N|1|1|A|1786
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9W0N_044 not in the Motif Atlas
- Homologous match to HL_8B0X_073
- Geometric discrepancy: 0.1226
- The information below is about HL_8B0X_073
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.3
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 10
Unit IDs
9W0N|1|1|U|1777
9W0N|1|1|U|1778
9W0N|1|1|U|1779
9W0N|1|1|A|1780
9W0N|1|1|U|1781
9W0N|1|1|U|1782
9W0N|1|1|A|1783
9W0N|1|1|A|1784
9W0N|1|1|A|1785
9W0N|1|1|A|1786
9W0N|1|1|A|1787
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain D
- Large ribosomal subunit protein bL34
- Chain b
- Large ribosomal subunit protein uL2
- Chain s
- Large ribosomal subunit protein uL22
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