HL_9W0N_054
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUCGGACAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9W0N_054 not in the Motif Atlas
- Homologous match to HL_8B0X_101
- Geometric discrepancy: 0.2455
- The information below is about HL_8B0X_101
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02452.3
- Basepair signature
- cWW-F-cWH-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9W0N|1|1|G|2304
9W0N|1|1|U|2305
9W0N|1|1|C|2306
9W0N|1|1|G|2307
9W0N|1|1|G|2308
9W0N|1|1|A|2309
9W0N|1|1|C|2310
9W0N|1|1|A|2311
9W0N|1|1|U|2312
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain 5
- Transfer RNA; tRNA
- Chain e
- Large ribosomal subunit protein uL5
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