HL_9W0N_100
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GAUCAGAAUGC
- Length
- 11 nucleotides
- Bulged bases
- 9W0N|1|3|U|1364
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9W0N_100 not in the Motif Atlas
- Homologous match to HL_8B0X_027
- Geometric discrepancy: 0.0963
- The information below is about HL_8B0X_027
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.3
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9W0N|1|3|G|1356
9W0N|1|3|A|1357
9W0N|1|3|U|1358
9W0N|1|3|C|1359
9W0N|1|3|A|1360
9W0N|1|3|G|1361
9W0N|1|3|A|1362
9W0N|1|3|A|1363
9W0N|1|3|U|1364
9W0N|1|3|G|1365
9W0N|1|3|C|1366
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain N
- Small ribosomal subunit protein uS9
- Chain O
- Small ribosomal subunit protein uS10
- Chain S
- Small ribosomal subunit protein uS14
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