HL_9W0N_107
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGGCUCAUAACCC
- Length
- 13 nucleotides
- Bulged bases
- 9W0N|1|6|C|34
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9W0N_107 not in the Motif Atlas
- Homologous match to HL_2BTE_006
- Geometric discrepancy: 0.3115
- The information below is about HL_2BTE_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9W0N|1|6|G|29
9W0N|1|6|G|30
9W0N|1|6|G|31
9W0N|1|6|C|32
9W0N|1|6|U|33
9W0N|1|6|C|34
9W0N|1|6|A|35
9W0N|1|6|U|36
9W0N|1|6|A|37
9W0N|1|6|A|38
9W0N|1|6|C|39
9W0N|1|6|C|40
9W0N|1|6|C|41
Current chains
- Chain 6
- tRNA(fMet)
Nearby chains
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain 4
- mRNA
- Chain 5
- Transfer RNA; tRNA
- Chain L
- Small ribosomal subunit protein uS7
- Chain N
- Small ribosomal subunit protein uS9
- Chain P
- Small ribosomal subunit protein uS11
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