HL_9WNQ_012

3D structure

PDB id

9WNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

GGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUUGACGUUAC

Length

43 nucleotides

Bulged bases

9WNQ|1|A|U|467, 9WNQ|1|A|U|485

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WNQ|1|A|G|446
9WNQ|1|A|G|447
9WNQ|1|A|A|448
9WNQ|1|A|G|449
9WNQ|1|A|G|450
9WNQ|1|A|A|451
9WNQ|1|A|A|452
9WNQ|1|A|G|453
9WNQ|1|A|G|454
9WNQ|1|A|G|455
9WNQ|1|A|A|456
9WNQ|1|A|G|457
9WNQ|1|A|U|458
9WNQ|1|A|A|459
9WNQ|1|A|A|460
9WNQ|1|A|A|461
9WNQ|1|A|G|462
9WNQ|1|A|U|463
9WNQ|1|A|U|464
9WNQ|1|A|A|465
9WNQ|1|A|A|466
9WNQ|1|A|U|467
9WNQ|1|A|A|468
9WNQ|1|A|C|469
9WNQ|1|A|C|470
9WNQ|1|A|U|471
9WNQ|1|A|U|472
9WNQ|1|A|U|473
9WNQ|1|A|G|474
9WNQ|1|A|C|475
9WNQ|1|A|U|476
9WNQ|1|A|C|477
9WNQ|1|A|A|478
9WNQ|1|A|U|479
9WNQ|1|A|U|480
9WNQ|1|A|G|481
9WNQ|1|A|A|482
9WNQ|1|A|C|483
9WNQ|1|A|G|484
9WNQ|1|A|U|485
9WNQ|1|A|U|486
9WNQ|1|A|A|487
9WNQ|1|A|C|488

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain D

30S ribosomal protein S4

Chain P

30S ribosomal protein S16