9WNQ Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_9WNQ_001 | 1/A/12:22 | No text annotation | homologous HL_6CZR_072 NA | |
| HL_9WNQ_002 | 1/A/75:95 | No text annotation | ||
| HL_9WNQ_003 | 1/A/158:163 | GNRA | homologous HL_6CZR_074 NA | |
| HL_9WNQ_004 | 1/A/186:191 | GNRA | geometric HL_1U9S_004 HL_34789.3 | |
| HL_9WNQ_006 | 1/A/259:267 | GNRA related | homologous HL_6CZR_077 NA | |
| HL_9WNQ_007 | 1/A/296:301 | GNRA | homologous HL_6CZR_078 NA | |
| HL_9WNQ_008 | 1/A/320:333 | No text annotation | homologous HL_6CZR_079 NA | |
| HL_9WNQ_009 | 1/A/342:347 | UNCG | homologous HL_6CZR_080 NA | |
| HL_9WNQ_010 | 1/A/379:384 | GNRA | homologous HL_6CZR_081 NA | |
| HL_9WNQ_011 | 1/A/419:424 | No text annotation | homologous HL_6CZR_082 NA | |
| HL_9WNQ_012 | 1/A/446:488 | No text annotation | ||
| HL_9WNQ_013 | 1/A/522:527 | GNRA variation | homologous HL_6CZR_216 NA | |
| HL_9WNQ_014 | 1/A/617:623 | No text annotation | homologous HL_6CZR_085 NA | |
| HL_9WNQ_015 | 1/A/689:698 | No text annotation | homologous HL_6CZR_086 NA | |
| HL_9WNQ_016 | 1/A/726:731 | GNRA | homologous HL_6CZR_087 NA | |
| HL_9WNQ_017 | 1/A/786:796 | No text annotation | homologous HL_6CZR_088 NA | |
| HL_9WNQ_018 | 1/A/840:846 | Mini UNCG | homologous HL_6CZR_089 NA | |
| HL_9WNQ_019 | 1/A/862:867 | GNRA | homologous HL_6CZR_090 NA | |
| HL_9WNQ_020 | 1/A/897:902 | GNRA | homologous HL_6CZR_091 NA | |
| HL_9WNQ_021 | 1/A/963:972 | No text annotation | homologous HL_6CZR_092 NA | |
| HL_9WNQ_022 | 1/A/1012:1017 | No text annotation | homologous HL_6CZR_217 NA | |
| HL_9WNQ_024 | 1/A/1076:1081 | GNRA | homologous HL_6CZR_095 NA | |
| HL_9WNQ_025 | 1/A/1089:1096 | No text annotation | ||
| HL_9WNQ_026 | 1/A/1132:1142 | No text annotation | ||
| HL_9WNQ_027 | 1/A/1134:1141 | No text annotation | ||
| HL_9WNQ_028 | 1/A/1165:1171 | GNRA | homologous HL_6CZR_098 NA | |
| HL_9WNQ_029 | 1/A/1265:1270 | No text annotation | homologous HL_6CZR_099 NA | |
| HL_9WNQ_030 | 1/A/1314:1323 | T-loop with 3 stacked bulged bases | homologous HL_6CZR_100 NA | |
| HL_9WNQ_031 | 1/A/1356:1366 | No text annotation | homologous HL_6CZR_101 NA | |
| HL_9WNQ_032 | 1/A/1449:1454 | No text annotation | geometric HL_8B0X_028 HL_61337.3 | |
| HL_9WNQ_033 | 1/A/1515:1520 | GNRA | homologous HL_6CZR_103 NA | |
| HL_9WNQ_034 | 1/X/13:22 | tRNA D-loop | homologous HL_1QF6_001 HL_20490.1 | |
| HL_9WNQ_035 | 1/X/28:42 | No text annotation | homologous HL_5HR7_005 HL_50006.5 | |
| HL_9WNQ_036 | 1/X/53:61 | T-loop with 2 stacked bulged bases | homologous HL_6UFH_008 HL_33597.3 | |
| HL_9WNQ_037 | 1/Y/13:23 | tRNA D-loop | homologous HL_5AXM_001 HL_20490.1 | |
| HL_9WNQ_038 | 1/Y/32:40 | tRNA anticodon loop | homologous HL_9MTS_102 HL_81376.3 | |
| HL_9WNQ_039 | 1/Y/54:62 | T-loop with 2 stacked bulged bases | homologous HL_5WT1_003 HL_33597.3 | |
| HL_9WNQ_040 | 1/Z/13:23 | No text annotation | homologous HL_7YSE_001 NA | |
| HL_9WNQ_041 | 1/Z/32:40 | tRNA anticodon loop | homologous HL_6GSK_203 HL_81376.3 | |
| HL_9WNQ_042 | 1/Z/54:62 | T-loop with 2 stacked bulged bases | homologous HL_5WT1_003 HL_33597.3 | |
| HL_9WNQ_043 | 1/a/38:44 | No text annotation | homologous HL_4V9F_071 HL_59381.2 | |
| HL_9WNQ_044 | 1/a/86:90 | No text annotation | geometric HL_8B0X_098 HL_90436.3 | |
| HL_9WNQ_045 | 1/b/59:68 | No text annotation | geometric HL_8B0X_033 HL_35677.5 | |
| HL_9WNQ_046 | 1/b/87:95 | No text annotation | geometric HL_8B0X_034 HL_65821.1 | |
| HL_9WNQ_047 | 1/b/123:128 | No text annotation | homologous HL_7A0S_003 HL_82710.3 | |
| HL_9WNQ_048 | 1/b/137:142 | No text annotation | geometric HL_8B0X_036 HL_61337.3 | |
| HL_9WNQ_049 | 1/b/158:168 | No text annotation | geometric HL_8B0X_037 HL_50765.2 | |
| HL_9WNQ_050 | 1/b/194:201 | No text annotation | homologous HL_7A0S_006 HL_48677.1 | |
| HL_9WNQ_051 | 1/b/225:230 | No text annotation | geometric HL_8B0X_039 HL_63151.1 | |
| HL_9WNQ_052 | 1/b/246:252 | No text annotation | homologous HL_7A0S_008 HL_76371.2 | |
| HL_9WNQ_053 | 1/b/305:312 | T-loop with 1 bulged base | homologous HL_7A0S_010 HL_13999.3 | |
| HL_9WNQ_054 | 1/b/319:323 | No text annotation | geometric HL_9E6Q_011 HL_75660.7 | |
| HL_9WNQ_055 | 1/b/327:335 | T-loop with unstacked turn | homologous HL_7A0S_012 HL_27670.4 | |
| HL_9WNQ_056 | 1/b/382:392 | No text annotation | homologous HL_7A0S_013 HL_91503.8 | |
| HL_9WNQ_057 | 1/b/410:417 | Pseudoknot geometry | homologous HL_7A0S_014 HL_30680.5 | |
| HL_9WNQ_058 | 1/b/462:467 | GNRA | homologous HL_7A0S_015 HL_34789.3 | |
| HL_9WNQ_059 | 1/b/487:493 | GNRA | homologous HL_7A0S_016 HL_34789.3 | |
| HL_9WNQ_060 | 1/b/544:549 | Mini UNCG with extended bulge | homologous HL_7A0S_017 HL_90436.3 | |
| HL_9WNQ_061 | 1/b/566:575 | T-loop with 2 stacked bulged bases | homologous HL_7A0S_018 HL_33597.3 | |
| HL_9WNQ_062 | 1/b/611:617 | No text annotation | ||
| HL_9WNQ_063 | 1/b/629:634 | GNRA | homologous HL_7A0S_020 HL_34789.3 | |
| HL_9WNQ_064 | 1/b/641:647 | No text annotation | ||
| HL_9WNQ_065 | 1/b/712:719 | No text annotation | geometric HL_8B0X_052 HL_98423.3 | |
| HL_9WNQ_066 | 1/b/744:753 | No text annotation | homologous HL_7A0S_022 HL_50204.1 | |
| HL_9WNQ_067 | 1/b/779:785 | UNCG variation | homologous HL_7A0S_023 HL_51020.2 | |
| HL_9WNQ_068 | 1/b/826:831 | No text annotation | homologous HL_7A0S_024 HL_27530.1 | |
| HL_9WNQ_069 | 1/b/884:892 | No text annotation | ||
| HL_9WNQ_070 | 1/b/955:962 | GNRA | homologous HL_7A0S_026 HL_34789.3 | |
| HL_9WNQ_071 | 1/b/978:985 | No text annotation | homologous HL_7A0S_027 HL_47171.1 | |
| HL_9WNQ_073 | 1/b/1172:1177 | No text annotation | geometric HL_8B0X_023 HL_13184.2 | |
| HL_9WNQ_074 | 1/b/1222:1227 | GNRA | homologous HL_7A0S_031 HL_34789.3 | |
| HL_9WNQ_075 | 1/b/1281:1289 | T-loop with 2 stacked bulged bases | homologous HL_7A0S_032 HL_33597.3 | |
| HL_9WNQ_076 | 1/b/1324:1330 | Pseudoknot geometry with 3' bulge | homologous HL_7A0S_033 HL_49081.1 | |
| HL_9WNQ_077 | 1/b/1363:1368 | GNRA variation | homologous HL_7A0S_034 HL_34789.3 | |
| HL_9WNQ_078 | 1/b/1389:1398 | No text annotation | homologous HL_7A0S_035 HL_77449.1 | |
| HL_9WNQ_079 | 1/b/1451:1459 | No text annotation | geometric HL_8B0X_064 HL_00557.1 | |
| HL_9WNQ_080 | 1/b/1492:1498 | No text annotation | homologous HL_7A0S_037 HL_39243.1 | |
| HL_9WNQ_081 | 1/b/1531:1540 | No text annotation | ||
| HL_9WNQ_082 | 1/b/1565:1568 | Mini UNCG | homologous HL_7A0S_039 HL_90436.3 | |
| HL_9WNQ_083 | 1/b/1612:1619 | No text annotation | homologous HL_7A0S_040 HL_28592.2 | |
| HL_9WNQ_084 | 1/b/1630:1636 | No text annotation | geometric HL_8B0X_069 HL_34789.3 | |
| HL_9WNQ_085 | 1/b/1691:1696 | UNCG | homologous HL_7A0S_042 HL_61337.3 | |
| HL_9WNQ_086 | 1/b/1728:1731 | No text annotation | geometric HL_9E6Q_039 HL_90436.3 | |
| HL_9WNQ_087 | 1/b/1752:1756 | No text annotation | homologous HL_7A0S_044 HL_80709.5 | |
| HL_9WNQ_088 | 1/b/1777:1787 | No text annotation | geometric HL_4WF9_043 HL_87681.1 | |
| HL_9WNQ_089 | 1/b/1806:1811 | GNRA | homologous HL_7A0S_046 HL_93535.2 | |
| HL_9WNQ_090 | 1/b/1868:1873 | GNRA | homologous HL_7A0S_047 HL_34789.3 | |
| HL_9WNQ_091 | 1/b/1910:1920 | No text annotation | geometric HL_8OI5_044 HL_82185.1 | |
| HL_9WNQ_092 | 1/b/1949:1957 | No text annotation | homologous HL_7A0S_048 HL_61418.2 | |
| HL_9WNQ_093 | 1/b/2027:2036 | No text annotation | homologous HL_7A0S_049 HL_78372.1 | |
| HL_9WNQ_095 | 1/b/2209:2215 | No text annotation | geometric HL_8B0X_079 HL_42293.1 | |
| HL_9WNQ_096 | 1/b/2248:2256 | No text annotation | homologous HL_7A0S_052 HL_11974.2 | |
| HL_9WNQ_097 | 1/b/2264:2276 | No text annotation | homologous HL_7A0S_053 HL_02042.1 | |
| HL_9WNQ_098 | 1/b/2304:2312 | No text annotation | geometric HL_9E6Q_072 HL_02452.1 | |
| HL_9WNQ_099 | 1/b/2324:2331 | Pseudoknot geometry | homologous HL_7A0S_055 HL_52651.2 | |
| HL_9WNQ_100 | 1/b/2356:2361 | No text annotation | geometric HL_8B0X_084 HL_34789.3 | |
| HL_9WNQ_101 | 1/b/2374:2379 | GNRA | homologous HL_7A0S_057 HL_34789.3 | |
| HL_9WNQ_102 | 1/b/2404:2413 | No text annotation | homologous HL_7A0S_058 HL_51853.2 | |
| HL_9WNQ_103 | 1/b/2471:2479 | No text annotation | homologous HL_7A0S_059 HL_52011.1 | |
| HL_9WNQ_104 | 1/b/2528:2535 | GNRA variation | homologous HL_7A0S_060 HL_46665.2 | |
| HL_9WNQ_105 | 1/b/2551:2557 | No text annotation | homologous HL_7A0S_061 HL_48677.1 | |
| HL_9WNQ_106 | 1/b/2594:2599 | GNRA | homologous HL_7A0S_062 HL_34789.3 | |
| HL_9WNQ_107 | 1/b/2658:2663 | GNRA | homologous HL_7A0S_063 HL_34789.3 | |
| HL_9WNQ_108 | 1/b/2701:2706 | Ribsomal LSU H95 | homologous HL_7A0S_064 HL_12125.2 | |
| HL_9WNQ_109 | 1/b/2745:2759 | No text annotation | homologous HL_7A0S_065 HL_53269.2 | |
| HL_9WNQ_110 | 1/b/2796:2799 | Mini UNCG | geometric HL_5SWD_005 HL_90436.3 | |
| HL_9WNQ_111 | 1/b/2819:2827 | No text annotation | homologous HL_7A0S_067 HL_37889.1 | |
| HL_9WNQ_112 | 1/b/2856:2861 | GNRA | homologous HL_7A0S_068 HL_34789.3 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_9WNQ_005 | No text annotation | ||
| HL_9WNQ_023 | No text annotation | ||
| HL_9WNQ_072 | No text annotation | ||
| HL_9WNQ_094 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_9WNQ_001 | 1/A/30:34, 1/A/550:553 | No text annotation | geometric IL_8BH9_001 IL_65740.1 | |
| IL_9WNQ_002 | 1/A/44:45, 1/A/396:398 | Single bulged A | homologous IL_6CZR_114 NA | |
| IL_9WNQ_003 | 1/A/47:52, 1/A/359:361 | No text annotation | geometric IL_8B0X_003 IL_32983.2 | |
| IL_9WNQ_004 | 1/A/54:56, 1/A/356:357 | Minor groove platform | homologous IL_6CZR_116 NA | |
| IL_9WNQ_005 | 1/A/63:66, 1/A/103:104 | Multiple bulged bases | homologous IL_6CZR_117 NA | |
| IL_9WNQ_006 | 1/A/67:69, 1/A/99:102 | No text annotation | geometric IL_8B0X_006 IL_82096.1 | |
| IL_9WNQ_007 | 1/A/70:74, 1/A/96:98 | No text annotation | ||
| IL_9WNQ_008 | 1/A/128:131, 1/A/231:233 | No text annotation | ||
| IL_9WNQ_009 | 1/A/132:136, 1/A/227:230 | Minor groove platform related | homologous IL_6CZR_120 NA | |
| IL_9WNQ_010 | 1/A/144:146, 1/A/176:178 | Isolated cWH basepair | geometric IL_4WF9_045 IL_10892.2 | |
| IL_9WNQ_011 | 1/A/147:153, 1/A/168:175 | tWH-tWH-tHW-tHW | homologous IL_6CZR_121 NA | |
| IL_9WNQ_012 | 1/A/202:206, 1/A/213:215 | No text annotation | ||
| IL_9WNQ_013 | 1/A/242:247, 1/A/277:284 | Kink-turn with non-sequential stacking | homologous IL_6CZR_123 NA | |
| IL_9WNQ_014 | 1/A/249:252, 1/A/274:275 | No text annotation | homologous IL_6CZR_405 NA | |
| IL_9WNQ_015 | 1/A/292:293, 1/A/304:308 | C-loop | homologous IL_6CZR_125 NA | |
| IL_9WNQ_016 | 1/A/367:369, 1/A/392:393 | Single bulged U | homologous IL_6CZR_126 NA | |
| IL_9WNQ_017 | 1/A/370:377, 1/A/386:391 | No text annotation | ||
| IL_9WNQ_018 | 1/A/409:416, 1/A/427:433 | No text annotation | geometric IL_4LFB_017 IL_62329.1 | |
| IL_9WNQ_019 | 1/A/440:442, 1/A/492:497 | No text annotation | ||
| IL_9WNQ_020 | 1/A/504:511, 1/A/540:541 | SSU/LSU pseudoknot | homologous IL_6CZR_132 NA | |
| IL_9WNQ_021 | 1/A/515:521, 1/A/528:536 | Kink-turn related | homologous IL_6CZR_133 NA | |
| IL_9WNQ_022 | 1/A/569:575, 1/A/880:881 | No text annotation | homologous IL_6CZR_134 NA | |
| IL_9WNQ_023 | 1/A/580:584, 1/A/757:761 | tSH-tHW-tHS | homologous IL_6CZR_135 NA | |
| IL_9WNQ_025 | 1/A/594:596, 1/A/644:645 | Major groove platform | homologous IL_6CZR_407 NA | |
| IL_9WNQ_026 | 1/A/597:598, 1/A/640:643 | Major groove minor groove platform; mini C-loop | homologous IL_6CZR_137 NA | |
| IL_9WNQ_027 | 1/A/605:612, 1/A/628:633 | No text annotation | homologous IL_6CZR_408 NA | |
| IL_9WNQ_028 | 1/A/654:655, 1/A/751:754 | No text annotation | geometric IL_8B0X_030 IL_74641.2 | |
| IL_9WNQ_029 | 1/A/659:660, 1/A/745:747 | Single stack bend | geometric IL_7A0S_054 IL_15011.2 | |
| IL_9WNQ_030 | 1/A/662:666, 1/A/740:743 | Tandem non-canonical cWW pairs | homologous IL_6CZR_141 NA | |
| IL_9WNQ_031 | 1/A/673:677, 1/A/713:717 | Triple non-canonical cWW pairs | homologous IL_6CZR_409 NA | |
| IL_9WNQ_032 | 1/A/684:688, 1/A/699:706 | No text annotation | geometric IL_8B0X_034 IL_71972.1 | |
| IL_9WNQ_033 | 1/A/774:778, 1/A/804:805 | Left turn | homologous IL_6CZR_144 NA | |
| IL_9WNQ_034 | 1/A/779:783, 1/A/799:803 | tSH-tHW-tHS | homologous IL_6CZR_145 NA | |
| IL_9WNQ_035 | 1/A/887:894, 1/A/905:910 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | homologous IL_6CZR_364 NA | |
| IL_9WNQ_036 | 1/A/922:923, 1/A/1393:1395 | Single bulged A | homologous IL_6CZR_147 NA | |
| IL_9WNQ_037 | 1/A/925:927, 1/A/1390:1391 | Single bulged G | homologous IL_6CZR_148 NA | |
| IL_9WNQ_038 | 1/A/933:935, 1/A/1380:1384 | No text annotation | homologous IL_6CZR_410 NA | |
| IL_9WNQ_039 | 1/A/953:954, 1/A/1226:1228 | No text annotation | homologous IL_6CZR_150 NA | |
| IL_9WNQ_040 | 1/A/993:997, 1/A/1044:1045 | No text annotation | geometric IL_8B0X_042 IL_61370.1 | |
| IL_9WNQ_041 | 1/A/997:999, 1/A/1041:1044 | No text annotation | geometric IL_8OI5_066 IL_15698.5 | |
| IL_9WNQ_042 | 1/A/1048:1050, 1/A/1208:1209 | No text annotation | homologous IL_6CZR_152 NA | |
| IL_9WNQ_043 | 1/A/1052:1056, 1/A/1204:1206 | No text annotation | homologous IL_6CZR_154 NA | |
| IL_9WNQ_044 | 1/A/1057:1058, 1/A/1199:1203 | Minor groove platform | homologous IL_6CZR_155 NA | |
| IL_9WNQ_045 | 1/A/1060:1061, 1/A/1195:1197 | Single bulged U | homologous IL_6CZR_156 NA | |
| IL_9WNQ_046 | 1/A/1061:1063, 1/A/1193:1195 | Isolated non-canonical cWW pair | homologous IL_6CZR_157 NA | |
| IL_9WNQ_047 | 1/A/1124:1128, 1/A/1144:1149 | No text annotation | geometric IL_8B0X_050 IL_38603.1 | |
| IL_9WNQ_048 | 1/A/1129:1132, 1/A/1142:1143 | Minor groove platform | geometric IL_3MXH_005 IL_87975.1 | |
| IL_9WNQ_049 | 1/A/1132:1134, 1/A/1141:1142 | Single stack bend | geometric IL_7A0S_054 IL_15011.2 | |
| IL_9WNQ_050 | 1/A/1158:1161, 1/A/1175:1181 | No text annotation | geometric IL_8B0X_052 IL_32376.1 | |
| IL_9WNQ_051 | 1/A/1247:1253, 1/A/1284:1290 | No text annotation | homologous IL_6CZR_160 NA | |
| IL_9WNQ_052 | 1/A/1255:1258, 1/A/1277:1282 | 180 degree turn | homologous IL_6CZR_161 NA | |
| IL_9WNQ_053 | 1/A/1259:1263, 1/A/1272:1276 | No text annotation | geometric IL_8B0X_055 IL_87767.2 | |
| IL_9WNQ_054 | 1/A/1303:1308, 1/A/1329:1334 | No text annotation | homologous IL_6CZR_164 NA | |
| IL_9WNQ_055 | 1/A/1399:1401, 1/A/1501:1504 | No text annotation | homologous IL_6CZR_165 NA | |
| IL_9WNQ_056 | 1/A/1401:1404, 1/A/1497:1501 | No text annotation | homologous IL_6CZR_368 NA | |
| IL_9WNQ_057 | 1/A/1405:1407, 1/A/1494:1496 | Isolated non-canonical cWW pair | geometric IL_8CRE_468 IL_01003.3 | |
| IL_9WNQ_058 | 1/A/1407:1409, 1/A/1491:1494 | No text annotation | geometric IL_4LFB_070 IL_29925.2 | |
| IL_9WNQ_059 | 1/A/1412:1414, 1/A/1486:1488 | Isolated non-canonical cWW pair | homologous IL_6CZR_411 NA | |
| IL_9WNQ_060 | 1/A/1416:1419, 1/A/1481:1484 | Double sheared | homologous IL_6CZR_169 NA | |
| IL_9WNQ_061 | 1/A/1430:1435, 1/A/1466:1470 | No text annotation | geometric IL_8B0X_062 IL_67427.1 | |
| IL_9WNQ_062 | 1/A/1440:1442, 1/A/1460:1461 | Minor groove platform | geometric IL_6DTD_003 IL_34520.3 | |
| IL_9WNQ_063 | 1/A/1445:1448, 1/A/1455:1457 | No text annotation | geometric IL_8B0X_064 IL_05502.1 | |
| IL_9WNQ_064 | 1/a/17:18, 1/a/65:67 | Major groove intercalation | homologous IL_4V9F_101 IL_14190.2 | |
| IL_9WNQ_065 | 1/a/23:28, 1/a/56:60 | No text annotation | homologous IL_7A0S_103 IL_18472.5 | |
| IL_9WNQ_066 | 1/a/30:31, 1/a/51:54 | Major groove minor groove platform; mini C-loop | homologous IL_4V9F_103 IL_73108.2 | |
| IL_9WNQ_067 | 1/a/34:38, 1/a/44:48 | No text annotation | homologous IL_7A0S_113 IL_58103.12 | |
| IL_9WNQ_068 | 1/a/71:79, 1/a/97:105 | Bacterial 5S Loop E | homologous IL_7A0S_106 IL_71138.1 | |
| IL_9WNQ_069 | 1/b/24:30, 1/b/510:516 | Triple sheared with non-canonical cWW | homologous IL_7A0S_001 IL_22311.1 | |
| IL_9WNQ_070 | 1/b/36:37, 1/b/442:444 | Single bulged A | homologous IL_7A0S_002 IL_14190.2 | |
| IL_9WNQ_071 | 1/b/39:41, 1/b/438:440 | Isolated cWH basepair | geometric IL_4KTG_002 IL_10892.2 | |
| IL_9WNQ_072 | 1/b/43:44, 1/b/434:436 | Minor groove platform | homologous IL_7A0S_003 IL_34520.3 | |
| IL_9WNQ_073 | 1/b/81:85, 1/b/97:105 | Kink-turn | homologous IL_7A0S_004 IL_94910.1 | |
| IL_9WNQ_074 | 1/b/183:184, 1/b/212:214 | Single stack bend | homologous IL_7A0S_005 IL_15011.2 | |
| IL_9WNQ_075 | 1/b/188:194, 1/b/201:208 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_7A0S_006 IL_62167.3 | |
| IL_9WNQ_076 | 1/b/239:245, 1/b/253:258 | No text annotation | geometric IL_8B0X_071 IL_02666.1 | |
| IL_9WNQ_077 | 1/b/269:271, 1/b/366:370 | No text annotation | ||
| IL_9WNQ_078 | 1/b/273:281, 1/b/359:364 | No text annotation | ||
| IL_9WNQ_079 | 1/b/293:295, 1/b/343:347 | No text annotation | geometric IL_4WF9_014 IL_76658.1 | |
| IL_9WNQ_080 | 1/b/481:484, 1/b/496:509 | No text annotation | geometric IL_8B0X_075 IL_44923.1 | |
| IL_9WNQ_081 | 1/b/536:539, 1/b/554:557 | No text annotation | geometric IL_8B0X_076 IL_58355.2 | |
| IL_9WNQ_082 | 1/b/564:566, 1/b/575:577 | Isolated non-canonical cWW pair | homologous IL_7A0S_011 IL_71625.2 | |
| IL_9WNQ_083 | 1/b/591:593, 1/b/664:666 | Isolated cWH basepair | geometric IL_4KQ0_004 IL_10892.2 | |
| IL_9WNQ_084 | 1/b/606:610, 1/b/618:622 | AAA cross-strand stack | homologous IL_7A0S_013 IL_66798.3 | |
| IL_9WNQ_085 | 1/b/672:674, 1/b/806:808 | Isolated non-canonical cWW pair | homologous IL_7A0S_014 IL_01003.3 | |
| IL_9WNQ_086 | 1/b/674:678, 1/b/799:806 | tHW-tHW cross-strand stack | homologous IL_7A0S_015 IL_73855.1 | |
| IL_9WNQ_087 | 1/b/697:698, 1/b/763:765 | Single bulged A | homologous IL_7A0S_016 IL_14190.2 | |
| IL_9WNQ_088 | 1/b/702:703, 1/b/728:730 | Single bulged G | homologous IL_7A0S_017 IL_28408.2 | |
| IL_9WNQ_089 | 1/b/703:707, 1/b/724:728 | No text annotation | geometric IL_8B0X_083 IL_15190.2 | |
| IL_9WNQ_090 | 1/b/738:741, 1/b/756:758 | Major groove platform with extra cWW | homologous IL_7A0S_019 IL_36931.2 | |
| IL_9WNQ_091 | 1/b/775:777, 1/b/787:791 | No text annotation | geometric IL_8B0X_085 IL_89509.1 | |
| IL_9WNQ_092 | 1/b/844:848, 1/b/930:934 | No text annotation | ||
| IL_9WNQ_093 | 1/b/850:851, 1/b/926:928 | No text annotation | geometric IL_8B0X_089 IL_15011.2 | |
| IL_9WNQ_094 | 1/b/856:862, 1/b/915:921 | No text annotation | geometric IL_8B0X_090 IL_94128.1 | |
| IL_9WNQ_095 | 1/b/862:863, 1/b/913:915 | Minor groove platform | homologous IL_7A0S_028 IL_34520.3 | |
| IL_9WNQ_096 | 1/b/864:868, 1/b/909:912 | C-loop | homologous IL_7A0S_029 IL_16301.1 | |
| IL_9WNQ_097 | 1/b/870:872, 1/b/905:907 | Isolated near basepair | homologous IL_7A0S_030 IL_42997.5 | |
| IL_9WNQ_098 | 1/b/875:879, 1/b/898:902 | No text annotation | ||
| IL_9WNQ_099 | 1/b/879:881, 1/b/895:898 | Isolated non-canonical cWW pair | geometric IL_5ZTM_001 IL_01003.3 | |
| IL_9WNQ_100 | 1/b/994:996, 1/b/1159:1160 | Single bulged C | homologous IL_7A0S_032 IL_05642.2 | |
| IL_9WNQ_101 | 1/b/998:1002, 1/b/1153:1157 | UAA/GAN | homologous IL_7A0S_033 IL_08938.1 | |
| IL_9WNQ_102 | 1/b/1004:1011, 1/b/1150:1151 | SSU/LSU pseudoknot | homologous IL_7A0S_034 IL_11411.1 | |
| IL_9WNQ_103 | 1/b/1011:1013, 1/b/1149:1150 | Single bulged U | homologous IL_7A0S_035 IL_97561.3 | |
| IL_9WNQ_104 | 1/b/1018:1024, 1/b/1140:1144 | Kink-turn related | homologous IL_7A0S_036 IL_57188.6 | |
| IL_9WNQ_105 | 1/b/1024:1030, 1/b/1124:1140 | No text annotation | geometric IL_8B0X_101 IL_50715.4 | |
| IL_9WNQ_106 | 1/b/1031:1034, 1/b/1121:1123 | Isolated non-canonical cWW pair | homologous IL_7A0S_038 IL_76400.1 | |
| IL_9WNQ_107 | 1/b/1038:1041, 1/b/1114:1117 | No text annotation | geometric IL_8B0X_103 IL_15225.2 | |
| IL_9WNQ_108 | 1/b/1043:1053, 1/b/1107:1112 | No text annotation | ||
| IL_9WNQ_110 | 1/b/1196:1198, 1/b/1247:1250 | Isolated cWS basepair | homologous IL_7A0S_041 IL_42997.5 | |
| IL_9WNQ_111 | 1/b/1202:1206, 1/b/1240:1243 | No text annotation | ||
| IL_9WNQ_112 | 1/b/1208:1215, 1/b/1234:1238 | Kink-turn | homologous IL_7A0S_043 IL_90775.2 | |
| IL_9WNQ_113 | 1/b/1262:1269, 1/b/2011:2017 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_7A0S_045 IL_62167.3 | |
| IL_9WNQ_114 | 1/b/1303:1305, 1/b/1623:1625 | Isolated cWH basepair | geometric IL_3R1D_002 IL_10892.2 | |
| IL_9WNQ_115 | 1/b/1310:1313, 1/b/1603:1604 | Major groove platform; stack outside cWW | geometric IL_4WF9_049 IL_74641.2 | |
| IL_9WNQ_116 | 1/b/1319:1323, 1/b/1331:1333 | C-loop | homologous IL_7A0S_047 IL_06671.1 | |
| IL_9WNQ_117 | 1/b/1351:1355, 1/b/1376:1380 | UAA/GAN | homologous IL_7A0S_048 IL_89021.3 | |
| IL_9WNQ_118 | 1/b/1357:1361, 1/b/1370:1374 | tSH-tHW-tHS | homologous IL_7A0S_049 IL_05821.1 | |
| IL_9WNQ_119 | 1/b/1415:1416, 1/b/1582:1587 | No text annotation | ||
| IL_9WNQ_120 | 1/b/1417:1421, 1/b/1577:1581 | UAA/GAN | homologous IL_7A0S_051 IL_08938.1 | |
| IL_9WNQ_121 | 1/b/1432:1435, 1/b/1557:1561 | No text annotation | ||
| IL_9WNQ_122 | 1/b/1437:1440, 1/b/1551:1555 | tSH-tHW | homologous IL_7A0S_053 IL_74317.1 | |
| IL_9WNQ_123 | 1/b/1450:1451, 1/b/1459:1461 | No text annotation | geometric IL_8B0X_117 IL_97561.3 | |
| IL_9WNQ_124 | 1/b/1468:1471, 1/b/1520:1524 | No text annotation | geometric IL_8B0X_118 IL_68574.5 | |
| IL_9WNQ_125 | 1/b/1474:1478, 1/b/1513:1517 | Double sheared with near cWW | homologous IL_7A0S_056 IL_87767.2 | |
| IL_9WNQ_126 | 1/b/1481:1483, 1/b/1506:1510 | No text annotation | ||
| IL_9WNQ_127 | 1/b/1486:1488, 1/b/1501:1503 | Isolated cWH basepair | geometric IL_3SJ2_001 IL_10892.2 | |
| IL_9WNQ_128 | 1/b/1489:1491, 1/b/1499:1500 | No text annotation | geometric IL_8B0X_121 IL_14190.2 | |
| IL_9WNQ_129 | 1/b/1526:1529, 1/b/1542:1546 | No text annotation | geometric IL_8B0X_122 IL_45790.2 | |
| IL_9WNQ_130 | 1/b/1651:1656, 1/b/2004:2006 | No text annotation | homologous IL_7A0S_059 IL_12566.5 | |
| IL_9WNQ_131 | 1/b/1663:1665, 1/b/1995:1997 | Isolated tWW turn | homologous IL_7A0S_060 IL_10432.1 | |
| IL_9WNQ_132 | 1/b/1666:1669, 1/b/1993:1994 | No text annotation | geometric IL_8B0X_125 IL_74641.2 | |
| IL_9WNQ_133 | 1/b/1666:1674, 1/b/1990:1994 | No text annotation | geometric IL_4WF9_117 IL_80252.1 | |
| IL_9WNQ_134 | 1/b/1669:1674, 1/b/1990:1993 | Intercalated tWH | homologous IL_7A0S_062 IL_28217.1 | |
| IL_9WNQ_135 | 1/b/1686:1691, 1/b/1696:1702 | tSH-tSH-tHH-tHS | homologous IL_7A0S_063 IL_20700.1 | |
| IL_9WNQ_136 | 1/b/1712:1718, 1/b/1742:1746 | No text annotation | geometric IL_8B0X_128 IL_82100.1 | |
| IL_9WNQ_137 | 1/b/1720:1724, 1/b/1736:1740 | No text annotation | geometric IL_8B0X_129 IL_70744.1 | |
| IL_9WNQ_138 | 1/b/1727:1728, 1/b/1731:1733 | No text annotation | geometric IL_8GLP_269 IL_05642.2 | |
| IL_9WNQ_139 | 1/b/1770:1771, 1/b/1980:1982 | Single bulged A | homologous IL_7A0S_064 IL_14190.2 | |
| IL_9WNQ_140 | 1/b/1798:1804, 1/b/1813:1821 | Kink-turn related | homologous IL_7A0S_065 IL_17069.6 | |
| IL_9WNQ_141 | 1/b/1837:1840, 1/b/1902:1903 | Minor groove platform, major groove intercalation | homologous IL_7A0S_066 IL_55206.1 | |
| IL_9WNQ_142 | 1/b/1841:1842, 1/b/1898:1901 | Major groove intercalation | homologous IL_7A0S_067 IL_77710.1 | |
| IL_9WNQ_143 | 1/b/1846:1849, 1/b/1893:1894 | No text annotation | geometric IL_8B0X_135 IL_73108.2 | |
| IL_9WNQ_144 | 1/b/1851:1860, 1/b/1882:1891 | No text annotation | ||
| IL_9WNQ_145 | 1/b/1864:1867, 1/b/1874:1878 | No text annotation | geometric IL_8B0X_136 IL_77691.7 | |
| IL_9WNQ_146 | 1/b/1933:1934, 1/b/1964:1967 | No text annotation | geometric IL_8B0X_137 IL_24886.2 | |
| IL_9WNQ_147 | 1/b/1934:1945, 1/b/1961:1964 | No text annotation | homologous IL_7A0S_072 IL_04332.3 | |
| IL_9WNQ_148 | 1/b/2050:2052, 1/b/2617:2618 | Major groove platform | homologous IL_7A0S_073 IL_48076.8 | |
| IL_9WNQ_149 | 1/b/2054:2056, 1/b/2612:2615 | No text annotation | geometric IL_8B0X_140 IL_80025.1 | |
| IL_9WNQ_150 | 1/b/2067:2069, 1/b/2442:2443 | Single bulged U | homologous IL_7A0S_075 IL_97561.3 | |
| IL_9WNQ_151 | 1/b/2070:2071, 1/b/2438:2441 | Minor groove platform | homologous IL_7A0S_076 IL_34520.3 | |
| IL_9WNQ_152 | 1/b/2081:2083, 1/b/2236:2239 | Isolated tHS basepair with bulges | homologous IL_7A0S_077 IL_87316.1 | |
| IL_9WNQ_153 | 1/b/2085:2087, 1/b/2232:2234 | Isolated non-canonical cWW pair | homologous IL_7A0S_078 IL_71625.2 | |
| IL_9WNQ_160 | 1/b/2202:2204, 1/b/2220:2221 | No text annotation | geometric IL_8B0X_146 IL_97561.3 | |
| IL_9WNQ_161 | 1/b/2297:2299, 1/b/2317:2321 | No text annotation | geometric IL_8B0X_147 IL_14250.1 | |
| IL_9WNQ_162 | 1/b/2350:2353, 1/b/2364:2367 | Double sheared | homologous IL_7A0S_081 IL_58355.2 | |
| IL_9WNQ_163 | 1/b/2401:2403, 1/b/2414:2415 | Major groove platform | homologous IL_7A0S_082 IL_48076.8 | |
| IL_9WNQ_164 | 1/b/2453:2454, 1/b/2498:2500 | Single stack bend | homologous IL_7A0S_083 IL_15011.2 | |
| IL_9WNQ_165 | 1/b/2454:2455, 1/b/2496:2498 | Major groove platform | homologous IL_7A0S_084 IL_48076.8 | |
| IL_9WNQ_166 | 1/b/2457:2459, 1/b/2493:2494 | Major groove platform | homologous IL_7A0S_085 IL_48076.8 | |
| IL_9WNQ_167 | 1/b/2459:2461, 1/b/2489:2493 | Major groove minor groove platform with extra cWW | homologous IL_7A0S_086 IL_36931.2 | |
| IL_9WNQ_168 | 1/b/2466:2470, 1/b/2480:2484 | Double sheared with non-canonical cWW | homologous IL_7A0S_087 IL_87767.2 | |
| IL_9WNQ_169 | 1/b/2507:2508, 1/b/2580:2582 | Major groove platform | homologous IL_7A0S_088 IL_46637.2 | |
| IL_9WNQ_170 | 1/b/2510:2512, 1/b/2574:2578 | Isolated non-canonical cWW with bulges | homologous IL_7A0S_089 IL_68118.3 | |
| IL_9WNQ_171 | 1/b/2512:2513, 1/b/2571:2574 | Multiple bulged bases | homologous IL_7A0S_090 IL_44609.2 | |
| IL_9WNQ_172 | 1/b/2522:2523, 1/b/2540:2543 | Major groove platform with intercalation | homologous IL_7A0S_091 IL_94991.2 | |
| IL_9WNQ_173 | 1/b/2589:2591, 1/b/2603:2605 | Isolated cWH basepair | geometric IL_4J50_001 IL_10892.2 | |
| IL_9WNQ_174 | 1/b/2591:2592, 1/b/2601:2603 | No text annotation | geometric IL_8B0X_159 IL_14190.2 | |
| IL_9WNQ_175 | 1/b/2592:2594, 1/b/2599:2601 | Other IL | homologous IL_7A0S_092 IL_10892.2 | |
| IL_9WNQ_176 | 1/b/2634:2636, 1/b/2782:2784 | Isolated cWH basepair | geometric IL_4WF9_045 IL_10892.2 | |
| IL_9WNQ_177 | 1/b/2636:2640, 1/b/2774:2782 | tSH-tHS-tHW | homologous IL_7A0S_093 IL_04638.4 | |
| IL_9WNQ_178 | 1/b/2652:2658, 1/b/2663:2668 | Sarcin-Ricin target in LSU H95; G-bulge | homologous IL_7A0S_094 IL_16458.6 | |
| IL_9WNQ_179 | 1/b/2680:2684, 1/b/2725:2727 | C-loop | homologous IL_7A0S_095 IL_63596.12 | |
| IL_9WNQ_180 | 1/b/2687:2691, 1/b/2718:2722 | UAA/GAN related, with intercalation | homologous IL_7A0S_096 IL_82016.1 | |
| IL_9WNQ_181 | 1/b/2695:2696, 1/b/2711:2714 | Multiple bulged bases | homologous IL_7A0S_097 IL_44609.2 | |
| IL_9WNQ_182 | 1/b/2737:2742, 1/b/2762:2767 | UAA/GAN with extra cWW | homologous IL_7A0S_098 IL_91079.1 | |
| IL_9WNQ_183 | 1/b/2795:2796, 1/b/2799:2801 | No text annotation | geometric IL_8B0X_166 IL_14190.2 | |
| IL_9WNQ_184 | 1/b/2806:2811, 1/b/2889:2892 | No text annotation | ||
| IL_9WNQ_185 | 1/b/2838:2839, 1/b/2878:2880 | Major groove intercalation | homologous IL_7A0S_099 IL_28408.2 | |
| IL_9WNQ_186 | 1/b/2843:2846, 1/b/2870:2874 | No text annotation | geometric IL_8B0X_169 IL_60988.2 | |
| IL_9WNQ_187 | 1/b/2847:2852, 1/b/2865:2869 | No text annotation | homologous IL_7A0S_101 IL_48489.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_9WNQ_024 | Isolated cWH basepair | ||
| IL_9WNQ_109 | No text annotation | ||
| IL_9WNQ_154 | No text annotation | ||
| IL_9WNQ_155 | No text annotation | ||
| IL_9WNQ_156 | No text annotation | ||
| IL_9WNQ_157 | No text annotation | ||
| IL_9WNQ_158 | No text annotation | ||
| IL_9WNQ_159 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_9WNQ_001 | 1/A/46:47, 1/A/361:367, 1/A/393:395 | No text annotation | geometric J3_8B0X_001 J3_58657.1 | |
| J3_9WNQ_002 | 1/A/46:52, 1/A/359:367, 1/A/393:395 | No text annotation | homologous J3_6CZR_058 NA | |
| J3_9WNQ_003 | 1/A/586:588, 1/A/651:654, 1/A/754:755 | No text annotation | geometric J3_4LFB_011 J3_01633.1 | |
| J3_9WNQ_004 | 1/A/586:588, 1/A/651:655, 1/A/751:755 | No text annotation | homologous J3_6CZR_077 NA | |
| J3_9WNQ_005 | 1/A/672:673, 1/A/717:725, 1/A/732:734 | No text annotation | homologous J3_6CZR_017 NA | |
| J3_9WNQ_006 | 1/A/826:829, 1/A/857:861, 1/A/868:874 | No text annotation | homologous J3_6CZR_018 NA | |
| J3_9WNQ_007 | 1/A/936:939, 1/A/1344:1350, 1/A/1372:1379 | No text annotation | homologous J3_6CZR_061 NA | |
| J3_9WNQ_008 | 1/A/943:946, 1/A/1235:1237, 1/A/1337:1340 | No text annotation | homologous J3_6CZR_019 NA | |
| J3_9WNQ_009 | 1/A/955:962, 1/A/973:984, 1/A/1221:1225 | No text annotation | geometric J3_8B0X_007 J3_88451.1 | |
| J3_9WNQ_010 | 1/A/990:993, 1/A/1045:1047, 1/A/1210:1215 | No text annotation | geometric J3_8B0X_008 J3_84394.1 | |
| J3_9WNQ_011 | 1/A/990:997, 1/A/1044:1047, 1/A/1210:1215 | No text annotation | homologous J3_6CZR_063 NA | |
| J3_9WNQ_012 | 1/A/1002:1008, 1/A/1021:1027, 1/A/1034:1038 | No text annotation | ||
| J3_9WNQ_013 | 1/A/1063:1068, 1/A/1107:1113, 1/A/1187:1193 | No text annotation | homologous J3_6CZR_023 NA | |
| J3_9WNQ_014 | 1/A/1073:1074, 1/A/1083:1086, 1/A/1099:1102 | No text annotation | homologous J3_6CZR_079 NA | |
| J3_9WNQ_015 | 1/A/1116:1118, 1/A/1155:1158, 1/A/1181:1184 | No text annotation | geometric J3_8B0X_012 J3_82365.5 | |
| J3_9WNQ_016 | 1/A/1116:1118, 1/A/1155:1161, 1/A/1175:1184 | No text annotation | homologous J3_6CZR_025 NA | |
| J3_9WNQ_017 | 1/A/1237:1241, 1/A/1296:1303, 1/A/1334:1337 | No text annotation | homologous J3_6CZR_026 NA | |
| J3_9WNQ_018 | 1/a/10:16, 1/a/68:70, 1/a/106:110 | No text annotation | ||
| J3_9WNQ_019 | 1/b/30:31, 1/b/474:481, 1/b/509:510 | No text annotation | geometric J3_8B0X_014 J3_68715.1 | |
| J3_9WNQ_020 | 1/b/30:31, 1/b/474:484, 1/b/496:510 | No text annotation | homologous J3_7A0S_015 J3_17917.1 | |
| J3_9WNQ_021 | 1/b/32:35, 1/b/445:461, 1/b/468:473 | No text annotation | homologous J3_7A0S_016 J3_07616.1 | |
| J3_9WNQ_022 | 1/b/56:57, 1/b/70:76, 1/b/110:114 | No text annotation | homologous J3_7A0S_002 J3_01004.1 | |
| J3_9WNQ_023 | 1/b/297:301, 1/b/316:325, 1/b/337:341 | No text annotation | geometric J3_8B0X_034 J3_77124.1 | |
| J3_9WNQ_024 | 1/b/683:689, 1/b/773:775, 1/b/791:794 | No text annotation | homologous J3_7A0S_004 J3_46658.1 | |
| J3_9WNQ_025 | 1/b/698:700, 1/b/732:736, 1/b/760:763 | No text annotation | homologous J3_7A0S_005 J3_69816.1 | |
| J3_9WNQ_026 | 1/b/1298:1303, 1/b/1625:1627, 1/b/1639:1642 | No text annotation | homologous J3_7A0S_006 J3_32852.7 | |
| J3_9WNQ_027 | 1/b/1306:1309, 1/b/1605:1611, 1/b/1620:1622 | No text annotation | homologous J3_7A0S_007 J3_47341.1 | |
| J3_9WNQ_028 | 1/b/1344:1350, 1/b/1381:1385, 1/b/1402:1403 | No text annotation | ||
| J3_9WNQ_029 | 1/b/1424:1429, 1/b/1564:1565, 1/b/1568:1574 | No text annotation | homologous J3_7A0S_019 J3_34864.3 | |
| J3_9WNQ_030 | 1/b/2091:2093, 1/b/2196:2200, 1/b/2223:2228 | No text annotation | homologous J3_7A0S_009 J3_17460.1 | |
| J3_9WNQ_031 | 1/b/2295:2297, 1/b/2321:2323, 1/b/2332:2337 | No text annotation | geometric J3_8B0X_022 J3_05327.1 | |
| J3_9WNQ_032 | 1/b/2295:2299, 1/b/2317:2323, 1/b/2332:2337 | No text annotation | ||
| J3_9WNQ_033 | 1/b/2517:2520, 1/b/2545:2547, 1/b/2561:2567 | No text annotation | homologous J3_7A0S_011 J3_32601.6 | |
| J3_9WNQ_034 | 1/b/2789:2791, 1/b/2805:2806, 1/b/2892:2894 | No text annotation | ||
| J3_9WNQ_035 | 1/b/2812:2815, 1/b/2831:2836, 1/b/2882:2888 | No text annotation | ||
| J4_9WNQ_001 | 1/A/115:122, 1/A/239:240, 1/A/286:289, 1/A/311:312 | No text annotation | homologous J4_6CZR_027 NA | |
| J4_9WNQ_002 | 1/A/142:144, 1/A/178:184, 1/A/193:202, 1/A/215:221 | No text annotation | ||
| J4_9WNQ_003 | 1/A/575:577, 1/A/764:769, 1/A/810:821, 1/A/879:880 | No text annotation | homologous J4_6CZR_013 NA | |
| J4_9WNQ_004 | 1/X/3:10, 1/X/25:27, 1/X/43:49, 1/X/65:70 | No text annotation | ||
| J4_9WNQ_005 | 1/Y/4:10, 1/Y/26:28, 1/Y/44:53, 1/Y/63:70 | No text annotation | ||
| J4_9WNQ_006 | 1/Z/5:10, 1/Z/26:28, 1/Z/44:52, 1/Z/64:69 | No text annotation | ||
| J4_9WNQ_007 | 1/b/268:269, 1/b/370:375, 1/b/399:406, 1/b/421:424 | No text annotation | homologous J4_7A0S_001 J4_94698.1 | |
| J4_9WNQ_008 | 1/b/297:301, 1/b/316:319, 1/b/323:325, 1/b/337:341 | No text annotation | homologous J4_7A0S_002 J4_16174.1 | |
| J4_9WNQ_009 | 1/b/601:604, 1/b/624:628, 1/b/635:638, 1/b/650:656 | No text annotation | ||
| J4_9WNQ_010 | 1/b/1270:1276, 1/b/1294:1295, 1/b/1645:1648, 1/b/2009:2010 | No text annotation | homologous J4_7A0S_004 J4_64571.6 | |
| J4_9WNQ_011 | 1/b/1310:1314, 1/b/1338:1343, 1/b/1404:1405, 1/b/1597:1604 | No text annotation | ||
| J4_9WNQ_012 | 1/b/1313:1314, 1/b/1338:1343, 1/b/1404:1405, 1/b/1597:1603 | No text annotation | homologous J4_7A0S_006 J4_48150.1 | |
| J4_9WNQ_013 | 1/b/1444:1445, 1/b/1466:1467, 1/b/1525:1526, 1/b/1546:1547 | No text annotation | ||
| J4_9WNQ_014 | 1/b/1772:1776, 1/b/1788:1792, 1/b/1827:1830, 1/b/1975:1979 | No text annotation | homologous J4_7A0S_008 J4_61477.6 | |
| J4_9WNQ_015 | 1/b/1833:1835, 1/b/1905:1906, 1/b/1924:1933, 1/b/1967:1972 | No text annotation | ||
| J4_9WNQ_016 | 1/b/2285:2289, 1/b/2343:2347, 1/b/2370:2372, 1/b/2381:2383 | No text annotation | homologous J4_7A0S_009 J4_98139.1 | |
| J4_9WNQ_017 | 1/b/2643:2646, 1/b/2674:2676, 1/b/2731:2735, 1/b/2769:2771 | No text annotation | ||
| J5_9WNQ_001 | 1/A/36:39, 1/A/403:406, 1/A/436:440, 1/A/497:500, 1/A/545:548 | No text annotation | ||
| J5_9WNQ_002 | 1/A/36:39, 1/A/403:406, 1/A/436:442, 1/A/492:500, 1/A/545:548 | No text annotation | ||
| J5_9WNQ_003 | 1/A/58:61, 1/A/106:113, 1/A/314:316, 1/A/337:339, 1/A/350:354 | No text annotation | homologous J5_6CZR_021 NA | |
| J5_9WNQ_004 | 1/b/47:54, 1/b/116:121, 1/b/130:131, 1/b/148:150, 1/b/176:178 | No text annotation | ||
| J5_9WNQ_005 | 1/b/531:533, 1/b/560:564, 1/b/577:579, 1/b/1261:1262, 1/b/2017:2018 | No text annotation | homologous J5_7A0S_003 J5_43153.6 | |
| J5_9WNQ_006 | 1/b/584:589, 1/b/668:671, 1/b/809:812, 1/b/1195:1196, 1/b/1250:1256 | No text annotation | homologous J5_7A0S_004 J5_74302.6 | |
| J5_9WNQ_007 | 1/b/1674:1682, 1/b/1706:1707, 1/b/1751:1752, 1/b/1756:1764, 1/b/1988:1990 | No text annotation | homologous J5_7A0S_005 J5_99177.1 | |
| J5_9WNQ_008 | 1/b/2057:2064, 1/b/2446:2453, 1/b/2500:2507, 1/b/2582:2588, 1/b/2606:2611 | No text annotation | ||
| J6_9WNQ_001 | 1/b/45:46, 1/b/179:183, 1/b/214:224, 1/b/231:235, 1/b/262:266, 1/b/426:433 | No text annotation | ||
| J6_9WNQ_002 | 1/b/2074:2077, 1/b/2243:2246, 1/b/2258:2259, 1/b/2281:2284, 1/b/2384:2395, 1/b/2421:2435 | No text annotation | ||
| J7_9WNQ_001 | 1/b/8:15, 1/b/525:531, 1/b/2018:2023, 1/b/2040:2043, 1/b/2625:2630, 1/b/2788:2789, 1/b/2894:2895 | No text annotation | ||
| J7_9WNQ_002 | 1/b/817:822, 1/b/835:838, 1/b/940:946, 1/b/971:976, 1/b/987:991, 1/b/1163:1164, 1/b/1185:1190 | No text annotation |
Problematic loops
No problematic loops
Coloring options: