HL_9WNQ_038
3D structure
- PDB id
- 9WNQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- GUUCGGGAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9WNQ_038 not in the Motif Atlas
- Homologous match to HL_9MTS_102
- Geometric discrepancy: 0.1195
- The information below is about HL_9MTS_102
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 43
Unit IDs
9WNQ|1|Y|G|32
9WNQ|1|Y|U|33
9WNQ|1|Y|U|34
9WNQ|1|Y|C|35
9WNQ|1|Y|G|36
9WNQ|1|Y|G|37
9WNQ|1|Y|G|38
9WNQ|1|Y|A|39
9WNQ|1|Y|C|40
Current chains
- Chain Y
- A-tRNA(PRO),P-tRNA(PRO)
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain I
- 30S ribosomal protein S9
- Chain X
- Transfer RNA; tRNA
- Chain x
- mRNA
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