HL_9WNQ_045
3D structure
- PDB id
- 9WNQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- UGCUAAUCUG
- Length
- 10 nucleotides
- Bulged bases
- 9WNQ|1|b|C|61
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9WNQ_045 not in the Motif Atlas
- Geometric match to HL_8B0X_033
- Geometric discrepancy: 0.3341
- The information below is about HL_8B0X_033
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_35677.5
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
9WNQ|1|b|U|59
9WNQ|1|b|G|60
9WNQ|1|b|C|61
9WNQ|1|b|U|62
9WNQ|1|b|A|63
9WNQ|1|b|A|64
9WNQ|1|b|U|65
9WNQ|1|b|C|66
9WNQ|1|b|U|67
9WNQ|1|b|G|68
Current chains
- Chain b
- 23S ribosomal RNA
Nearby chains
- Chain 1
- Large ribosomal subunit protein uL29
- Chain u
- Large ribosomal subunit protein uL23
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