HL_9WNQ_065
3D structure
- PDB id
- 9WNQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- GGUAACAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9WNQ_065 not in the Motif Atlas
- Geometric match to HL_8B0X_052
- Geometric discrepancy: 0.1619
- The information below is about HL_8B0X_052
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_98423.3
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
9WNQ|1|b|G|712
9WNQ|1|b|G|713
9WNQ|1|b|U|714
9WNQ|1|b|A|715
9WNQ|1|b|A|716
9WNQ|1|b|C|717
9WNQ|1|b|A|718
9WNQ|1|b|C|719
Current chains
- Chain b
- 23S ribosomal RNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain O
- 30S ribosomal protein S15
Coloring options: