HL_9WNR_049
3D structure
- PDB id
- 9WNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- GAAACAUC
- Length
- 8 nucleotides
- Bulged bases
- 9WNR|1|b|A|196, 9WNR|1|b|A|199
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9WNR_049 not in the Motif Atlas
- Homologous match to HL_7A0S_006
- Geometric discrepancy: 0.123
- The information below is about HL_7A0S_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_48677.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
9WNR|1|b|G|194
9WNR|1|b|A|195
9WNR|1|b|A|196
9WNR|1|b|A|197
9WNR|1|b|C|198
9WNR|1|b|A|199
9WNR|1|b|U|200
9WNR|1|b|C|201
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 0
- Large ribosomal subunit protein bL28
- Chain X
- Transfer RNA; tRNA
- Chain m
- 50S ribosomal protein L15
Coloring options: