HL_9WNR_097
3D structure
- PDB id
- 9WNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- CUAAAGAGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 9WNR|1|b|A|2267, 9WNR|1|b|A|2268, 9WNR|1|b|C|2275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9WNR_097 not in the Motif Atlas
- Homologous match to HL_7A0S_053
- Geometric discrepancy: 0.2602
- The information below is about HL_7A0S_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.1
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
9WNR|1|b|C|2264
9WNR|1|b|U|2265
9WNR|1|b|A|2266
9WNR|1|b|A|2267
9WNR|1|b|A|2268
9WNR|1|b|G|2269
9WNR|1|b|A|2270
9WNR|1|b|G|2271
9WNR|1|b|U|2272
9WNR|1|b|A|2273
9WNR|1|b|A|2274
9WNR|1|b|C|2275
9WNR|1|b|G|2276
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain n
- 50S ribosomal protein L16
- Chain y
- Large ribosomal subunit protein bL27
Coloring options: