HL_9WNR_109
3D structure
- PDB id
- 9WNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 9WNR|1|b|G|2751, 9WNR|1|b|C|2755
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9WNR_109 not in the Motif Atlas
- Homologous match to HL_7A0S_065
- Geometric discrepancy: 0.2475
- The information below is about HL_7A0S_065
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53269.2
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 10
Unit IDs
9WNR|1|b|C|2745
9WNR|1|b|U|2746
9WNR|1|b|G|2747
9WNR|1|b|A|2748
9WNR|1|b|A|2749
9WNR|1|b|A|2750
9WNR|1|b|G|2751
9WNR|1|b|C|2752
9WNR|1|b|A|2753
9WNR|1|b|U|2754
9WNR|1|b|C|2755
9WNR|1|b|U|2756
9WNR|1|b|A|2757
9WNR|1|b|A|2758
9WNR|1|b|G|2759
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 8
- 50S ribosomal protein L36
- Chain g
- Large ribosomal subunit protein uL6
- Chain k
- 50S ribosomal protein L13
Coloring options: