HL_9WW4_084
3D structure
- PDB id
- 9WW4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- GUCGCCGUGCC
- Length
- 11 nucleotides
- Bulged bases
- 9WW4|1|BA|G|385
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9WW4_084 not in the Motif Atlas
- Geometric match to HL_8GLP_091
- Geometric discrepancy: 0.0567
- The information below is about HL_8GLP_091
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50525.1
- Basepair signature
- cWW-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9WW4|1|BA|G|377
9WW4|1|BA|U|378
9WW4|1|BA|C|379
9WW4|1|BA|G|380
9WW4|1|BA|C|381
9WW4|1|BA|C|382
9WW4|1|BA|G|383
9WW4|1|BA|U|384
9WW4|1|BA|G|385
9WW4|1|BA|C|386
9WW4|1|BA|C|387
Current chains
- Chain BA
- 18S rRNA (1740-MER)
Nearby chains
- Chain BH
- 40S ribosomal protein S8
- Chain BJ
- 40S ribosomal protein S11
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