HL_9WW4_090
3D structure
- PDB id
- 9WW4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- ACU(PSU)UAA(A2M)UCCUU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9WW4_090 not in the Motif Atlas
- Homologous match to HL_9SUM_083
- Geometric discrepancy: 0.1727
- The information below is about HL_9SUM_083
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68749.4
- Basepair signature
- cWW-cWW-F-F-tSH-F-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
9WW4|1|BA|A|569
9WW4|1|BA|C|570
9WW4|1|BA|U|571
9WW4|1|BA|PSU|572
9WW4|1|BA|U|573
9WW4|1|BA|A|574
9WW4|1|BA|A|575
9WW4|1|BA|A2M|576
9WW4|1|BA|U|577
9WW4|1|BA|C|578
9WW4|1|BA|C|579
9WW4|1|BA|U|580
9WW4|1|BA|U|581
Current chains
- Chain BA
- 18S rRNA (1740-MER)
Nearby chains
- Chain BB
- 40S ribosomal protein S4, X isoform
- Chain BX
- 40S ribosomal protein S9
- Chain Bc
- 40S ribosomal protein S24
Coloring options: