3D structure

PDB id
9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
human 80S ribosome rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.69 Å

Loop

Sequence
CCUUCGCGGG
Length
10 nucleotides
Bulged bases
9WW5|1|BA|U|198, 9WW5|1|BA|C|199
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9WW5|1|BA|C|195
9WW5|1|BA|C|196
9WW5|1|BA|U|197
9WW5|1|BA|U|198
9WW5|1|BA|C|199
9WW5|1|BA|G|200
9WW5|1|BA|C|201
9WW5|1|BA|G|202
9WW5|1|BA|G|203
9WW5|1|BA|G|204

Current chains

Chain BA
18S rRNA (1740-MER)

Nearby chains

Chain BH
40S ribosomal protein S8

Coloring options:

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