9WW5 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_9WW5_001 | 1/AA/37:44 | No text annotation | homologous HL_8GLP_001 HL_02262.2 | |
| HL_9WW5_002 | 1/AA/68:73 | No text annotation | homologous HL_8GLP_002 HL_23875.2 | |
| HL_9WW5_003 | 1/AA/89:95 | No text annotation | homologous HL_8GLP_003 HL_76371.5 | |
| HL_9WW5_005 | 1/AA/204:211 | No text annotation | homologous HL_8GLP_005 HL_13999.6 | |
| HL_9WW5_006 | 1/AA/222:226 | No text annotation | homologous HL_8GLP_006 HL_75660.11 | |
| HL_9WW5_007 | 1/AA/230:238 | No text annotation | homologous HL_9SUM_008 HL_27670.7 | |
| HL_9WW5_008 | 1/AA/289:298 | No text annotation | homologous HL_8GLP_008 HL_63894.5 | |
| HL_9WW5_009 | 1/AA/314:323 | No text annotation | homologous HL_8GLP_009 HL_00911.5 | |
| HL_9WW5_010 | 1/AA/368:373 | No text annotation | homologous HL_8GLP_010 HL_34789.7 | |
| HL_9WW5_011 | 1/AA/393:398 | No text annotation | homologous HL_8GLP_118 HL_34789.7 | |
| HL_9WW5_012 | 1/AA/1170:1191 | No text annotation | ||
| HL_9WW5_013 | 1/AA/1251:1259 | No text annotation | ||
| HL_9WW5_014 | 1/AA/1317:1326 | No text annotation | homologous HL_9SUM_015 HL_33597.8 | |
| HL_9WW5_015 | 1/AA/1364:1373 | No text annotation | ||
| HL_9WW5_016 | 1/AA/1389:1394 | No text annotation | homologous HL_8GLP_018 HL_34789.7 | |
| HL_9WW5_017 | 1/AA/1403:1414 | No text annotation | ||
| HL_9WW5_019 | 1/AA/1480:1484 | No text annotation | homologous HL_8GLP_021 HL_12111.1 | |
| HL_9WW5_020 | 1/AA/1561:1566 | No text annotation | homologous HL_8GLP_022 HL_34789.7 | |
| HL_9WW5_021 | 1/AA/1593:1602 | No text annotation | homologous HL_8GLP_023 HL_50204.4 | |
| HL_9WW5_022 | 1/AA/1627:1635 | No text annotation | homologous HL_8GLP_024 HL_28253.2 | |
| HL_9WW5_023 | 1/AA/1675:1680 | No text annotation | homologous HL_9H3G_028 HL_27530.4 | |
| HL_9WW5_024 | 1/AA/1754:1776 | No text annotation | ||
| HL_9WW5_025 | 1/AA/1816:1823 | No text annotation | homologous HL_8GLP_027 HL_63894.5 | |
| HL_9WW5_026 | 1/AA/1864:1870 | No text annotation | homologous HL_8GLP_028 HL_34789.7 | |
| HL_9WW5_027 | 1/AA/1886:1893 | No text annotation | homologous HL_9H3G_032 HL_47171.4 | |
| HL_9WW5_028 | 1/AA/1957:2026 | No text annotation | ||
| HL_9WW5_029 | 1/AA/2257:2261 | No text annotation | homologous HL_8GLP_031 HL_12111.1 | |
| HL_9WW5_030 | 1/AA/2317:2322 | No text annotation | homologous HL_8GLP_032 HL_34789.7 | |
| HL_9WW5_031 | 1/AA/2376:2384 | T-loop with 2 stacked bulged bases | homologous HL_8GLP_033 HL_33597.8 | |
| HL_9WW5_032 | 1/AA/2420:2426 | No text annotation | homologous HL_8GLP_034 HL_49081.3 | |
| HL_9WW5_033 | 1/AA/2458:2463 | No text annotation | homologous HL_8GLP_035 HL_34789.7 | |
| HL_9WW5_035 | 1/AA/2523:2532 | No text annotation | homologous HL_8GLP_038 HL_77449.4 | |
| HL_9WW5_037 | 1/AA/2578:2583 | No text annotation | homologous HL_8GLP_040 HL_34789.7 | |
| HL_9WW5_038 | 1/AA/2624:2632 | No text annotation | homologous HL_9SUM_034 HL_22758.4 | |
| HL_9WW5_039 | 1/AA/2664:2670 | No text annotation | homologous HL_8GLP_042 HL_52776.1 | |
| HL_9WW5_040 | 1/AA/2704:2712 | No text annotation | ||
| HL_9WW5_041 | 1/AA/2738:2742 | No text annotation | homologous HL_8GLP_044 HL_90436.6 | |
| HL_9WW5_042 | 1/AA/2792:2799 | No text annotation | homologous HL_8GLP_045 HL_28592.5 | |
| HL_9WW5_043 | 1/AA/2810:2816 | No text annotation | homologous HL_8GLP_046 HL_34789.7 | |
| HL_9WW5_044 | 1/AA/2872:2877 | No text annotation | homologous HL_9AXU_040 HL_61337.7 | |
| HL_9WW5_045 | 1/AA/3614:3618 | No text annotation | homologous HL_9H3G_048 HL_16651.3 | |
| HL_9WW5_046 | 1/AA/3639:3649 | No text annotation | homologous HL_9H3G_049 HL_87681.4 | |
| HL_9WW5_047 | 1/AA/3668:3674 | No text annotation | homologous HL_8GLP_051 HL_34789.7 | |
| HL_9WW5_048 | 1/AA/3724:3729 | No text annotation | homologous HL_9SUM_043 HL_34789.7 | |
| HL_9WW5_049 | 1/AA/3756:3768 | No text annotation | ||
| HL_9WW5_050 | 1/AA/3796:3804 | No text annotation | homologous HL_8GLP_054 HL_77449.4 | |
| HL_9WW5_051 | 1/AA/3873:3882 | No text annotation | homologous HL_8GLP_055 HL_78372.4 | |
| HL_9WW5_052 | 1/AA/3944:4069 | No text annotation | ||
| HL_9WW5_054 | 1/AA/4193:4201 | LSU P loop | homologous HL_8GLP_059 HL_11974.5 | |
| HL_9WW5_055 | 1/AA/4210:4222 | No text annotation | homologous HL_8GLP_060 HL_02042.4 | |
| HL_9WW5_056 | 1/AA/4250:4258 | No text annotation | homologous HL_9SUM_049 HL_02452.4 | |
| HL_9WW5_057 | 1/AA/4270:4277 | No text annotation | homologous HL_8GLP_062 HL_52651.5 | |
| HL_9WW5_058 | 1/AA/4301:4309 | No text annotation | homologous HL_8GLP_063 HL_15296.4 | |
| HL_9WW5_059 | 1/AA/4321:4326 | No text annotation | homologous HL_8GLP_064 HL_34789.7 | |
| HL_9WW5_060 | 1/AA/4352:4362 | No text annotation | homologous HL_8GLP_065 HL_14856.1 | |
| HL_9WW5_061 | 1/AA/4417:4425 | No text annotation | homologous HL_9SUM_054 HL_52011.4 | |
| HL_9WW5_062 | 1/AA/4474:4481 | No text annotation | homologous HL_8GLP_067 HL_02262.2 | |
| HL_9WW5_063 | 1/AA/4497:4503 | No text annotation | homologous HL_9SUM_056 HL_02262.2 | |
| HL_9WW5_064 | 1/AA/4540:4545 | No text annotation | homologous HL_8GLP_069 HL_34789.7 | |
| HL_9WW5_065 | 1/AA/4603:4608 | No text annotation | homologous HL_8GLP_070 HL_34789.7 | |
| HL_9WW5_066 | 1/AA/4646:4651 | No text annotation | homologous HL_8GLP_071 HL_12125.5 | |
| HL_9WW5_067 | 1/AA/4688:4702 | No text annotation | homologous HL_9SUM_060 HL_53269.5 | |
| HL_9WW5_068 | 1/AA/4907:4914 | No text annotation | homologous HL_8GLP_074 HL_31089.4 | |
| HL_9WW5_069 | 1/AA/4975:4983 | No text annotation | homologous HL_8GLP_075 HL_37889.4 | |
| HL_9WW5_071 | 1/AB/32:45 | No text annotation | geometric HL_8QYX_071 HL_01182.3 | |
| HL_9WW5_072 | 1/AB/36:41 | No text annotation | homologous HL_8QYX_072 HL_59381.5 | |
| HL_9WW5_073 | 1/AB/86:91 | No text annotation | homologous HL_8QYX_073 HL_34789.7 | |
| HL_9WW5_074 | 1/AC/47:56 | No text annotation | homologous HL_9SUM_068 HL_17803.4 | |
| HL_9WW5_075 | 1/AC/68:90 | No text annotation | homologous HL_9H3G_002 NA | |
| HL_9WW5_076 | 1/AC/107:112 | No text annotation | homologous HL_8GLP_080 HL_23875.2 | |
| HL_9WW5_078 | 1/BA/7:17 | No text annotation | homologous HL_9PN5_077 HL_73535.4 | |
| HL_9WW5_082 | 1/BA/288:295 | No text annotation | homologous HL_9PN5_082 HL_67772.4 | |
| HL_9WW5_084 | 1/BA/377:387 | No text annotation | geometric HL_8GLP_091 HL_50525.1 | |
| HL_9WW5_085 | 1/BA/416:421 | No text annotation | homologous HL_9PN5_085 HL_34789.7 | |
| HL_9WW5_086 | 1/BA/441:452 | No text annotation | homologous HL_9PN5_086 HL_86432.4 | |
| HL_9WW5_089 | 1/BA/539:544 | No text annotation | geometric HL_8Y0B_001 HL_69752.4 | |
| HL_9WW5_091 | 1/BA/618:623 | No text annotation | homologous HL_9PN5_091 HL_34789.7 | |
| HL_9WW5_092 | 1/BA/820:828 | No text annotation | homologous HL_9SUM_085 HL_11974.5 | |
| HL_9WW5_095 | 1/BA/957:966 | No text annotation | homologous HL_9SUM_087 HL_38491.5 | |
| HL_9WW5_096 | 1/BA/994:999 | No text annotation | homologous HL_9H3G_094 HL_34789.7 | |
| HL_9WW5_097 | 1/BA/1054:1064 | No text annotation | homologous HL_9H3G_095 HL_38491.5 | |
| HL_9WW5_098 | 1/BA/1113:1120 | No text annotation | ||
| HL_9WW5_099 | 1/BA/1141:1146 | No text annotation | homologous HL_9PN5_099 HL_34789.7 | |
| HL_9WW5_100 | 1/BA/1178:1183 | No text annotation | homologous HL_9SUM_091 HL_34789.7 | |
| HL_9WW5_101 | 1/BA/1245:1254 | No text annotation | homologous HL_9PN5_101 HL_97521.4 | |
| HL_9WW5_103 | 1/BA/1353:1358 | No text annotation | homologous HL_9H3G_101 HL_34789.7 | |
| HL_9WW5_104 | 1/BA/1366:1373 | No text annotation | homologous HL_9H3G_102 HL_63894.5 | |
| HL_9WW5_106 | 1/BA/1460:1466 | No text annotation | ||
| HL_9WW5_110 | 1/BA/1755:1777 | No text annotation | ||
| HL_9WW5_111 | 1/BA/1847:1852 | No text annotation | homologous HL_9PN5_111 HL_34789.7 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_9WW5_004 | No text annotation | ||
| HL_9WW5_018 | No text annotation | ||
| HL_9WW5_034 | No text annotation | ||
| HL_9WW5_036 | No text annotation | ||
| HL_9WW5_053 | No text annotation | ||
| HL_9WW5_070 | No text annotation | ||
| HL_9WW5_077 | No text annotation | ||
| HL_9WW5_079 | No text annotation | ||
| HL_9WW5_080 | No text annotation | ||
| HL_9WW5_081 | No text annotation | ||
| HL_9WW5_083 | No text annotation | ||
| HL_9WW5_087 | No text annotation | ||
| HL_9WW5_088 | No text annotation | ||
| HL_9WW5_090 | No text annotation | ||
| HL_9WW5_093 | No text annotation | ||
| HL_9WW5_094 | No text annotation | ||
| HL_9WW5_102 | No text annotation | ||
| HL_9WW5_105 | No text annotation | ||
| HL_9WW5_107 | No text annotation | ||
| HL_9WW5_108 | No text annotation | ||
| HL_9WW5_109 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_9WW5_001 | 1/AA/6:7, 1/AC/149:151 | Single bulged C | homologous IL_8GLP_001 IL_05642.6 | |
| IL_9WW5_002 | 1/AA/12:14, 1/AC/143:144 | Single bulged U | homologous IL_8GLP_002 IL_97561.8 | |
| IL_9WW5_003 | 1/AA/16:18, 1/AC/139:141 | Isolated non-canonical cWW pair | homologous IL_8GLP_003 IL_19025.1 | |
| IL_9WW5_004 | 1/AA/26:27, 1/AA/55:57 | Single stack bend | homologous IL_8GLP_004 IL_15011.6 | |
| IL_9WW5_005 | 1/AA/30:37, 1/AA/44:52 | 9x8 Sarcin-Ricin; G-bulge | homologous IL_8GLP_005 IL_93502.4 | |
| IL_9WW5_006 | 1/AA/81:88, 1/AA/96:102 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_8GLP_006 IL_62167.6 | |
| IL_9WW5_007 | 1/AA/118:122, 1/AA/147:153 | Kink-turn with embedded cWW pair | homologous IL_8GLP_287 IL_65996.1 | |
| IL_9WW5_008 | 1/AA/125:126, 1/AA/142:144 | Single bulged C | homologous IL_8GLP_009 IL_05642.6 | |
| IL_9WW5_009 | 1/AA/169:174, 1/AA/263:266 | No text annotation | ||
| IL_9WW5_013 | 1/AA/195:196, 1/AA/244:246 | Single bulged C | homologous IL_8GLP_015 IL_05642.6 | |
| IL_9WW5_014 | 1/AA/199:201, 1/AA/214:215 | Single bulged U | homologous IL_8GLP_016 IL_97561.8 | |
| IL_9WW5_015 | 1/AA/339:342, 1/AC/32:33 | Minor groove platform | homologous IL_8GLP_017 IL_26092.1 | |
| IL_9WW5_016 | 1/AA/348:350, 1/AC/25:26 | Single bulged A | homologous IL_8GLP_018 IL_14190.5 | |
| IL_9WW5_017 | 1/AA/387:390, 1/AA/401:414 | No text annotation | geometric IL_8GLP_019 IL_44923.4 | |
| IL_9WW5_018 | 1/AA/415:421, 1/AC/13:19 | No text annotation | homologous IL_8GLP_021 IL_22311.4 | |
| IL_9WW5_019 | 1/AA/443:446, 1/AA/1300:1304 | No text annotation | homologous IL_8GLP_022 IL_32983.4 | |
| IL_9WW5_020 | 1/AA/448:450, 1/AA/1297:1298 | No text annotation | ||
| IL_9WW5_022 | 1/AA/462:464, 1/AA/691:693 | Isolated non-canonical cWW pair | homologous IL_8GLP_025 IL_01003.7 | |
| IL_9WW5_023 | 1/AA/466:472, 1/AA/682:689 | No text annotation | ||
| IL_9WW5_025 | 1/AA/488:489, 1/AA/666:668 | Single bulged A | geometric IL_8VM9_003 IL_14190.5 | |
| IL_9WW5_031 | 1/AA/709:710, 1/AA/1286:1288 | Single bulged G | homologous IL_8GLP_034 IL_28408.5 | |
| IL_9WW5_032 | 1/AA/723:724, 1/AA/942:945 | No text annotation | homologous IL_8GLP_035 IL_09092.2 | |
| IL_9WW5_033 | 1/AA/727:731, 1/AA/938:939 | No text annotation | homologous IL_8GLP_036 IL_75501.2 | |
| IL_9WW5_034 | 1/AA/732:735, 1/AA/928:937 | No text annotation | homologous IL_8GLP_037 NA | |
| IL_9WW5_035 | 1/AA/737:740, 1/AA/925:926 | No text annotation | ||
| IL_9WW5_036 | 1/AA/740:742, 1/AA/922:925 | No text annotation | ||
| IL_9WW5_037 | 1/AA/745:752, 1/AA/911:919 | No text annotation | homologous IL_8GLP_040 IL_25001.3 | |
| IL_9WW5_039 | 1/AA/1073:1074, 1/AA/1237:1239 | Single bulged A | homologous IL_8GLP_041 IL_14190.5 | |
| IL_9WW5_040 | 1/AA/1082:1084, 1/AA/1213:1217 | No text annotation | homologous IL_8GLP_043 IL_84227.2 | |
| IL_9WW5_041 | 1/AA/1086:1087, 1/AA/1209:1211 | Single bulged C | homologous IL_8GLP_044 IL_05642.6 | |
| IL_9WW5_044 | 1/AA/1244:1245, 1/AA/1265:1267 | Single bulged G | homologous IL_8GLP_048 IL_28408.5 | |
| IL_9WW5_045 | 1/AA/1357:1360, 1/AA/1379:1382 | No text annotation | ||
| IL_9WW5_046 | 1/AA/1357:1361, 1/AA/1376:1382 | No text annotation | ||
| IL_9WW5_047 | 1/AA/1360:1361, 1/AA/1376:1379 | No text annotation | homologous IL_8GLP_050 IL_73464.3 | |
| IL_9WW5_048 | 1/AA/1425:1429, 1/AA/1455:1460 | No text annotation | homologous IL_8GLP_051 IL_47352.3 | |
| IL_9WW5_049 | 1/AA/1431:1434, 1/AA/1450:1453 | Double sheared | homologous IL_8GLP_052 IL_58355.5 | |
| IL_9WW5_050 | 1/AA/1467:1468, 1/AA/1496:1498 | Single bulged A | homologous IL_8GLP_053 IL_14190.5 | |
| IL_9WW5_051 | 1/AA/1474:1476, 1/AA/1489:1490 | Single stack bend | homologous IL_8GLP_054 IL_15011.6 | |
| IL_9WW5_052 | 1/AA/1479:1480, 1/AA/1484:1486 | Single bulged C | homologous IL_8GLP_055 IL_05642.6 | |
| IL_9WW5_053 | 1/AA/1520:1522, 1/AA/1655:1657 | No text annotation | homologous IL_9SUM_025 IL_01003.7 | |
| IL_9WW5_054 | 1/AA/1522:1526, 1/AA/1648:1655 | No text annotation | homologous IL_8GLP_290 IL_73855.4 | |
| IL_9WW5_055 | 1/AA/1545:1546, 1/AA/1612:1614 | Single bulged A | homologous IL_8GLP_057 IL_14190.5 | |
| IL_9WW5_056 | 1/AA/1550:1551, 1/AA/1576:1578 | Single bulged G | homologous IL_8GLP_058 IL_28408.5 | |
| IL_9WW5_057 | 1/AA/1551:1555, 1/AA/1572:1576 | No text annotation | homologous IL_8GLP_059 IL_15190.5 | |
| IL_9WW5_058 | 1/AA/1586:1589, 1/AA/1605:1607 | No text annotation | homologous IL_8GLP_060 IL_36931.5 | |
| IL_9WW5_059 | 1/AA/1590:1592, 1/AA/1603:1604 | Single bulged U | homologous IL_8GLP_061 IL_97561.8 | |
| IL_9WW5_060 | 1/AA/1624:1626, 1/AA/1636:1640 | No text annotation | homologous IL_8GLP_062 IL_89509.4 | |
| IL_9WW5_061 | 1/AA/1671:1673, 1/AA/1682:1684 | No text annotation | homologous IL_9SUM_033 IL_71625.6 | |
| IL_9WW5_062 | 1/AA/1686:1688, 1/AA/1848:1851 | No text annotation | homologous IL_8GLP_064 IL_16315.2 | |
| IL_9WW5_063 | 1/AA/1723:1725, 1/AA/1838:1839 | Single bulged G | homologous IL_9AXU_036 IL_28408.5 | |
| IL_9WW5_064 | 1/AA/1732:1737, 1/AA/1792:1797 | No text annotation | homologous IL_8GLP_291 IL_46203.1 | |
| IL_9WW5_065 | 1/AA/1737:1738, 1/AA/1790:1792 | Minor groove platform | homologous IL_9PN5_038 IL_37129.1 | |
| IL_9WW5_066 | 1/AA/1739:1744, 1/AA/1786:1789 | No text annotation | homologous IL_9H3G_046 IL_16301.4 | |
| IL_9WW5_067 | 1/AA/1746:1749, 1/AA/1781:1784 | Tandem non-canonical cWW pairs; U in syn | homologous IL_9PN5_040 IL_71194.5 | |
| IL_9WW5_068 | 1/AA/1749:1751, 1/AA/1779:1781 | Isolated non-canonical cWW pair | homologous IL_9PN5_041 IL_01003.7 | |
| IL_9WW5_069 | 1/AA/1814:1816, 1/AA/1823:1824 | Single bulged G | homologous IL_8GLP_072 IL_28408.5 | |
| IL_9WW5_070 | 1/AA/1858:1860, 1/AA/1874:1876 | Isolated non-canonical cWW pair | homologous IL_9H3G_052 IL_01003.7 | |
| IL_9WW5_072 | 1/AA/1905:1909, 1/AA/2067:2071 | UAA/GAN | homologous IL_8GLP_075 IL_08938.4 | |
| IL_9WW5_073 | 1/AA/1911:1918, 1/AA/2064:2065 | No text annotation | homologous IL_8GLP_076 IL_11411.4 | |
| IL_9WW5_074 | 1/AA/1918:1920, 1/AA/2063:2064 | Single bulged G | homologous IL_8GLP_077 IL_28408.5 | |
| IL_9WW5_075 | 1/AA/1920:1922, 1/AA/2062:2063 | Single bulged C | homologous IL_8GLP_078 IL_05642.6 | |
| IL_9WW5_076 | 1/AA/1926:1933, 1/AA/2053:2058 | No text annotation | homologous IL_8GLP_079 IL_39054.4 | |
| IL_9WW5_077 | 1/AA/1933:1944, 1/AA/2038:2053 | No text annotation | homologous IL_8GLP_080 IL_34501.4 | |
| IL_9WW5_078 | 1/AA/1946:1948, 1/AA/2035:2036 | Single bulged U | homologous IL_8GLP_081 IL_97561.8 | |
| IL_9WW5_079 | 1/AA/2083:2085, 1/AA/2272:2273 | Single bulged C | homologous IL_8GLP_083 IL_05642.6 | |
| IL_9WW5_080 | 1/AA/2290:2292, 1/AA/2342:2345 | No text annotation | homologous IL_8GLP_084 IL_84227.2 | |
| IL_9WW5_081 | 1/AA/2299:2301, 1/AA/2334:2335 | Single bulged A | homologous IL_8GLP_085 IL_14190.5 | |
| IL_9WW5_082 | 1/AA/2302:2309, 1/AA/2329:2333 | Kink-turn | homologous IL_8GLP_086 IL_90775.4 | |
| IL_9WW5_083 | 1/AA/2312:2314, 1/AA/2325:2326 | Single bulged A | homologous IL_8GLP_087 IL_14190.5 | |
| IL_9WW5_084 | 1/AA/2358:2364, 1/AA/3858:3863 | 7x6 Sarcin-Ricin; G-bulge | homologous IL_8GLP_300 IL_02666.4 | |
| IL_9WW5_085 | 1/AA/2406:2409, 1/AA/2783:2784 | Major groove platform; stack outside cWW | geometric IL_8GLP_089 IL_74641.5 | |
| IL_9WW5_086 | 1/AA/2415:2419, 1/AA/2427:2429 | No text annotation | homologous IL_8GLP_301 IL_06671.4 | |
| IL_9WW5_087 | 1/AA/2446:2450, 1/AA/2509:2514 | UAA/GAN | homologous IL_8GLP_091 IL_08938.4 | |
| IL_9WW5_088 | 1/AA/2476:2480, 1/AA/2498:2501 | No text annotation | ||
| IL_9WW5_089 | 1/AA/2542:2547, 1/AA/2772:2774 | No text annotation | homologous IL_8GLP_094 NA | |
| IL_9WW5_090 | 1/AA/2549:2550, 1/AA/2768:2770 | Single bulged U | homologous IL_8GLP_095 IL_97561.8 | |
| IL_9WW5_091 | 1/AA/2589:2593, 1/AA/2752:2756 | No text annotation | homologous IL_8GLP_096 IL_15190.5 | |
| IL_9WW5_092 | 1/AA/2613:2614, 1/AA/2724:2726 | Single bulged A | homologous IL_8GLP_097 IL_14190.5 | |
| IL_9WW5_093 | 1/AA/2614:2615, 1/AA/2722:2724 | Single stack bend | homologous IL_8GLP_098 IL_15011.6 | |
| IL_9WW5_094 | 1/AA/2646:2648, 1/AA/2685:2688 | No text annotation | homologous IL_8GLP_099 IL_87316.5 | |
| IL_9WW5_095 | 1/AA/2651:2653, 1/AA/2681:2682 | Single bulged G | homologous IL_8GLP_100 IL_28408.5 | |
| IL_9WW5_096 | 1/AA/2656:2662, 1/AA/2672:2678 | No text annotation | homologous IL_8GLP_101 IL_93476.4 | |
| IL_9WW5_097 | 1/AA/2832:2838, 1/AA/3850:3853 | No text annotation | homologous IL_9H3G_083 IL_89862.4 | |
| IL_9WW5_098 | 1/AA/2844:2846, 1/AA/3842:3844 | No text annotation | homologous IL_9SUM_069 IL_10432.4 | |
| IL_9WW5_099 | 1/AA/2847:2850, 1/AA/3840:3841 | Major groove platform; stack outside cWW | geometric IL_8GLP_304 IL_74641.5 | |
| IL_9WW5_100 | 1/AA/2847:2855, 1/AA/3837:3841 | No text annotation | geometric IL_8GLP_305 IL_80252.4 | |
| IL_9WW5_101 | 1/AA/2850:2855, 1/AA/3837:3840 | No text annotation | homologous IL_8GLP_107 IL_28217.4 | |
| IL_9WW5_102 | 1/AA/2867:2872, 1/AA/2877:2883 | No text annotation | homologous IL_8GLP_108 IL_20700.4 | |
| IL_9WW5_103 | 1/AA/2889:2891, 1/AA/3610:3612 | Isolated non-canonical cWW pair | homologous IL_8GLP_109 IL_01003.7 | |
| IL_9WW5_104 | 1/AA/2896:2897, 1/AA/3602:3605 | No text annotation | homologous IL_8GLP_110 IL_18824.4 | |
| IL_9WW5_105 | 1/AA/2901:2905, 1/AA/3589:3598 | No text annotation | ||
| IL_9WW5_107 | 1/AA/3632:3633, 1/AA/3827:3829 | Single bulged A | homologous IL_8GLP_113 IL_14190.5 | |
| IL_9WW5_108 | 1/AA/3660:3665, 1/AA/3677:3684 | No text annotation | homologous IL_8GLP_114 IL_14684.4 | |
| IL_9WW5_109 | 1/AA/3700:3703, 1/AA/3749:3750 | No text annotation | homologous IL_9SUM_078 IL_55206.4 | |
| IL_9WW5_110 | 1/AA/3704:3705, 1/AA/3745:3748 | No text annotation | homologous IL_8GLP_117 IL_71421.6 | |
| IL_9WW5_111 | 1/AA/3708:3714, 1/AA/3739:3742 | No text annotation | homologous IL_9SUM_080 NA | |
| IL_9WW5_112 | 1/AA/3715:3721, 1/AA/3732:3738 | No text annotation | homologous IL_9H3G_097 IL_65359.4 | |
| IL_9WW5_113 | 1/AA/3780:3781, 1/AA/3811:3814 | No text annotation | geometric IL_9AXU_083 IL_24886.5 | |
| IL_9WW5_114 | 1/AA/3781:3792, 1/AA/3808:3811 | No text annotation | homologous IL_9SUM_083 IL_84014.4 | |
| IL_9WW5_115 | 1/AA/3895:3898, 1/AA/4563:4565 | No text annotation | homologous IL_8GLP_127 IL_75527.5 | |
| IL_9WW5_116 | 1/AA/3900:3902, 1/AA/4558:4561 | No text annotation | homologous IL_8GLP_129 IL_80025.4 | |
| IL_9WW5_117 | 1/AA/3913:3915, 1/AA/4388:4389 | Single bulged U | homologous IL_8GLP_130 IL_97561.8 | |
| IL_9WW5_118 | 1/AA/3916:3917, 1/AA/4384:4387 | No text annotation | homologous IL_9SUM_087 IL_37129.1 | |
| IL_9WW5_119 | 1/AA/3927:3929, 1/AA/4181:4184 | No text annotation | homologous IL_9H3G_104 IL_87316.5 | |
| IL_9WW5_120 | 1/AA/4082:4088, 1/AA/4161:4164 | No text annotation | homologous IL_8GLP_135 IL_52092.4 | |
| IL_9WW5_121 | 1/AA/4091:4129, 1/AA/4155:4158 | No text annotation | ||
| IL_9WW5_123 | 1/AA/4191:4192, 1/AA/4202:4204 | AG tHS outside loop | homologous IL_8GLP_137 IL_14190.5 | |
| IL_9WW5_124 | 1/AA/4243:4245, 1/AA/4263:4267 | No text annotation | homologous IL_9PN5_095 IL_14250.4 | |
| IL_9WW5_125 | 1/AA/4291:4293, 1/AA/4317:4318 | Single bulged A | geometric IL_9AXU_093 IL_14190.5 | |
| IL_9WW5_126 | 1/AA/4295:4298, 1/AA/4312:4315 | Tandem non-canonical cWW pairs | homologous IL_9AXU_094 IL_15225.5 | |
| IL_9WW5_127 | 1/AA/4347:4350, 1/AA/4364:4365 | No text annotation | homologous IL_9H3G_115 IL_57267.1 | |
| IL_9WW5_128 | 1/AA/4400:4403, 1/AA/4440:4444 | No text annotation | homologous IL_9SUM_096 IL_10004.1 | |
| IL_9WW5_129 | 1/AA/4403:4405, 1/AA/4439:4440 | No text annotation | homologous IL_9SUM_097 IL_46637.5 | |
| IL_9WW5_130 | 1/AA/4405:4407, 1/AA/4435:4439 | No text annotation | homologous IL_9H3G_119 IL_36931.5 | |
| IL_9WW5_131 | 1/AA/4412:4416, 1/AA/4426:4430 | No text annotation | homologous IL_8GLP_145 IL_87767.5 | |
| IL_9WW5_132 | 1/AA/4453:4454, 1/AA/4526:4528 | No text annotation | homologous IL_8GLP_146 IL_46637.5 | |
| IL_9WW5_133 | 1/AA/4456:4458, 1/AA/4520:4524 | No text annotation | homologous IL_9SUM_101 IL_30722.2 | |
| IL_9WW5_134 | 1/AA/4458:4459, 1/AA/4517:4520 | No text annotation | homologous IL_9SUM_102 IL_44609.5 | |
| IL_9WW5_135 | 1/AA/4466:4468, 1/AA/4489:4491 | Isolated non-canonical cWW pair | geometric IL_8GLP_149 IL_01003.7 | |
| IL_9WW5_136 | 1/AA/4466:4470, 1/AA/4485:4491 | No text annotation | geometric IL_8GLP_315 IL_56912.1 | |
| IL_9WW5_137 | 1/AA/4468:4470, 1/AA/4485:4489 | No text annotation | homologous IL_8GLP_150 IL_09353.2 | |
| IL_9WW5_138 | 1/AA/4495:4497, 1/AA/4503:4505 | Isolated non-canonical cWW pair | homologous IL_8GLP_152 IL_01003.7 | |
| IL_9WW5_139 | 1/AA/4537:4538, 1/AA/4547:4549 | No text annotation | homologous IL_9SUM_107 IL_14190.5 | |
| IL_9WW5_140 | 1/AA/4580:4582, 1/AA/4721:4723 | Isolated cWH basepair | homologous IL_8GLP_157 IL_10892.5 | |
| IL_9WW5_141 | 1/AA/4582:4585, 1/AA/4717:4721 | No text annotation | homologous IL_8GLP_158 IL_46211.1 | |
| IL_9WW5_142 | 1/AA/4590:4592, 1/AA/4618:4620 | Isolated non-canonical cWW pair | homologous IL_8GLP_316 IL_71625.6 | |
| IL_9WW5_143 | 1/AA/4596:4603, 1/AA/4608:4614 | Sarcin-Ricin target in LSU H95; G-bulge | homologous IL_8GLP_159 IL_34443.2 | |
| IL_9WW5_144 | 1/AA/4624:4629, 1/AA/4669:4673 | No text annotation | homologous IL_8GLP_317 IL_31690.2 | |
| IL_9WW5_145 | 1/AA/4632:4637, 1/AA/4662:4666 | No text annotation | homologous IL_8GLP_318 IL_43276.1 | |
| IL_9WW5_146 | 1/AA/4638:4640, 1/AA/4659:4661 | Isolated cWH basepair | homologous IL_8GLP_162 IL_10892.5 | |
| IL_9WW5_147 | 1/AA/4641:4642, 1/AA/4655:4658 | No text annotation | homologous IL_8GLP_163 IL_44609.5 | |
| IL_9WW5_148 | 1/AA/4680:4685, 1/AA/4705:4710 | No text annotation | homologous IL_8GLP_164 IL_91079.1 | |
| IL_9WW5_149 | 1/AA/4740:4743, 1/AA/4957:4959 | Isolated non-canonical cWW pair | homologous IL_9PN5_117 IL_01003.7 | |
| IL_9WW5_150 | 1/AA/4743:4746, 1/AA/4954:4957 | Tandem non-canonical cWW pairs | homologous IL_8GLP_166 IL_15225.5 | |
| IL_9WW5_151 | 1/AA/4749:4751, 1/AA/4948:4951 | No text annotation | homologous IL_8GLP_167 IL_31990.1 | |
| IL_9WW5_152 | 1/AA/4756:4765, 1/AA/4869:4877 | No text annotation | homologous IL_8GLP_168 NA | |
| IL_9WW5_153 | 1/AA/4769:4771, 1/AA/4863:4865 | Isolated non-canonical cWW pair | homologous IL_8GLP_169 IL_71625.6 | |
| IL_9WW5_154 | 1/AA/4885:4889, 1/AA/4930:4934 | No text annotation | homologous IL_8GLP_170 NA | |
| IL_9WW5_155 | 1/AA/4891:4896, 1/AA/4924:4928 | No text annotation | homologous IL_8GLP_171 NA | |
| IL_9WW5_157 | 1/AA/4972:4975, 1/AA/4983:4986 | Tandem non-canonical cWW pairs | homologous IL_9H3G_140 IL_71194.5 | |
| IL_9WW5_158 | 1/AA/4992:4994, 1/AA/5057:5059 | Isolated non-canonical cWW pair | homologous IL_8GLP_173 IL_01003.7 | |
| IL_9WW5_159 | 1/AA/4996:4997, 1/AA/5053:5055 | Single bulged C | homologous IL_8GLP_174 IL_05642.6 | |
| IL_9WW5_160 | 1/AA/5000:5002, 1/AA/5045:5050 | No text annotation | homologous IL_9H3G_143 IL_00086.4 | |
| IL_9WW5_161 | 1/AA/5003:5009, 1/AA/5039:5044 | No text annotation | homologous IL_8GLP_176 NA | |
| IL_9WW5_162 | 1/AA/5012:5014, 1/AA/5035:5036 | No text annotation | homologous IL_9SUM_125 IL_97561.8 | |
| IL_9WW5_163 | 1/AA/5014:5017, 1/AA/5032:5035 | No text annotation | homologous IL_9SUM_126 IL_58355.5 | |
| IL_9WW5_164 | 1/AB/15:16, 1/AB/62:64 | Single bulged C | homologous IL_8QYX_165 IL_05642.6 | |
| IL_9WW5_165 | 1/AB/21:27, 1/AB/52:57 | No text annotation | homologous IL_8QYX_166 IL_41504.3 | |
| IL_9WW5_166 | 1/AB/28:29, 1/AB/48:51 | No text annotation | homologous IL_8QYX_167 IL_73108.5 | |
| IL_9WW5_167 | 1/AB/32:36, 1/AB/41:45 | Symmetric double minor groove platform | homologous IL_8QYX_168 IL_58103.15 | |
| IL_9WW5_168 | 1/AB/71:78, 1/AB/98:104 | 8x7 Sarcin-Ricin; G-bulge | homologous IL_8QYX_169 IL_62879.2 | |
| IL_9WW5_169 | 1/AB/79:81, 1/AB/95:97 | No text annotation | homologous IL_8QYX_170 IL_81485.1 | |
| IL_9WW5_170 | 1/AB/82:85, 1/AB/92:94 | Isolated non-canonical cWW pair | homologous IL_8QYX_171 IL_01003.7 | |
| IL_9WW5_171 | 1/AC/64:66, 1/AC/92:95 | No text annotation | homologous IL_8GLP_187 IL_30722.2 | |
| IL_9WW5_172 | 1/BA/23:25, 1/BA/649:651 | Isolated non-canonical cWW pair | geometric IL_8OI5_023 IL_01003.7 | |
| IL_9WW5_173 | 1/BA/37:40, 1/BA/514:518 | Double sheared | geometric IL_8GLP_190 IL_58355.5 | |
| IL_9WW5_174 | 1/BA/41:47, 1/BA/479:481 | No text annotation | homologous IL_9H3G_158 IL_88082.5 | |
| IL_9WW5_178 | 1/BA/108:112, 1/BA/349:353 | No text annotation | geometric IL_9SUM_187 IL_71154.6 | |
| IL_9WW5_179 | 1/BA/112:115, 1/BA/348:349 | No text annotation | homologous IL_9H3G_163 IL_71421.6 | |
| IL_9WW5_180 | 1/BA/116:121, 1/BA/343:347 | No text annotation | homologous IL_9PN5_151 IL_31545.4 | |
| IL_9WW5_181 | 1/BA/130:144, 1/BA/175:182 | No text annotation | ||
| IL_9WW5_189 | 1/BA/359:364, 1/BA/396:403 | No text annotation | homologous IL_9SUM_155 IL_46174.7 | |
| IL_9WW5_190 | 1/BA/366:371, 1/BA/393:394 | No text annotation | homologous IL_9PN5_160 IL_01372.4 | |
| IL_9WW5_191 | 1/BA/411:413, 1/BA/424:429 | No text annotation | homologous IL_9H3G_175 IL_93336.4 | |
| IL_9WW5_192 | 1/BA/437:439, 1/BA/454:456 | Isolated cWH basepair | homologous IL_9PN5_162 IL_10892.5 | |
| IL_9WW5_198 | 1/BA/563:565, 1/BA/585:592 | No text annotation | homologous IL_9PN5_168 IL_02511.3 | |
| IL_9WW5_200 | 1/BA/599:606, 1/BA/636:637 | No text annotation | homologous IL_9SUM_165 IL_11411.4 | |
| IL_9WW5_202 | 1/BA/611:617, 1/BA/624:632 | Kink-turn related | homologous IL_9PN5_173 IL_52042.4 | |
| IL_9WW5_203 | 1/BA/663:665, 1/BA/1162:1164 | Isolated non-canonical cWW pair | homologous IL_9H3G_188 IL_19025.1 | |
| IL_9WW5_204 | 1/BA/665:671, 1/BA/1161:1162 | No text annotation | homologous IL_9PN5_174 IL_20847.4 | |
| IL_9WW5_205 | 1/BA/673:675, 1/BA/1030:1032 | Isolated non-canonical cWW pair | homologous IL_9H3G_190 IL_01003.7 | |
| IL_9WW5_206 | 1/BA/676:680, 1/BA/1025:1029 | No text annotation | homologous IL_9PN5_176 IL_05821.4 | |
| IL_9WW5_207 | 1/BA/802:803, 1/BA/860:863 | No text annotation | homologous IL_9SUM_173 IL_73108.5 | |
| IL_9WW5_209 | 1/BA/807:815, 1/BA/849:856 | No text annotation | homologous IL_9H3G_194 IL_59049.5 | |
| IL_9WW5_211 | 1/BA/874:876, 1/BA/910:912 | Isolated non-canonical cWW pair | geometric IL_8GLP_233 IL_01003.7 | |
| IL_9WW5_213 | 1/BA/922:923, 1/BA/1019:1022 | Major groove platform; stack outside cWW | geometric IL_8GLP_235 IL_74641.5 | |
| IL_9WW5_214 | 1/BA/925:926, 1/BA/1015:1017 | Single bulged U | geometric IL_7KVT_002 IL_97561.8 | |
| IL_9WW5_215 | 1/BA/928:931, 1/BA/1010:1013 | Tandem non-canonical cWW pairs | homologous IL_9PN5_184 IL_15225.5 | |
| IL_9WW5_216 | 1/BA/931:935, 1/BA/1007:1010 | Tandem non-canonical cWW pairs | homologous IL_9PN5_185 IL_15225.5 | |
| IL_9WW5_217 | 1/BA/942:945, 1/BA/981:984 | Tandem non-canonical cWW pairs | homologous IL_9PN5_186 IL_15225.5 | |
| IL_9WW5_218 | 1/BA/949:950, 1/BA/975:977 | Single stack bend | geometric IL_7MLX_001 IL_15011.6 | |
| IL_9WW5_220 | 1/BA/952:956, 1/BA/967:974 | Kink-turn | homologous IL_9H3G_202 IL_71972.2 | |
| IL_9WW5_221 | 1/BA/1042:1047, 1/BA/1071:1073 | No text annotation | homologous IL_9SUM_183 IL_31690.2 | |
| IL_9WW5_222 | 1/BA/1047:1051, 1/BA/1067:1071 | No text annotation | homologous IL_9PN5_190 IL_05821.4 | |
| IL_9WW5_223 | 1/BA/1091:1093, 1/BA/1152:1158 | No text annotation | homologous IL_9H3G_205 IL_82706.5 | |
| IL_9WW5_224 | 1/BA/1098:1103, 1/BA/1129:1134 | Tandem non-canonical cWW pairs with near WC pairs | geometric IL_4EYA_005 IL_82292.3 | |
| IL_9WW5_225 | 1/BA/1108:1110, 1/BA/1123:1124 | Single stack bend | homologous IL_9H3G_207 IL_15011.6 | |
| IL_9WW5_226 | 1/BA/1168:1175, 1/BA/1186:1191 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | homologous IL_9PN5_194 IL_84044.4 | |
| IL_9WW5_227 | 1/BA/1203:1204, 1/BA/1694:1696 | Single bulged A | homologous IL_9PN5_195 IL_14190.5 | |
| IL_9WW5_228 | 1/BA/1206:1208, 1/BA/1691:1692 | No text annotation | homologous IL_9SUM_191 IL_28408.5 | |
| IL_9WW5_229 | 1/BA/1214:1217, 1/BA/1681:1685 | No text annotation | homologous IL_9SUM_192 IL_63596.15 | |
| IL_9WW5_231 | 1/BA/1231:1233, 1/BA/1525:1528 | No text annotation | geometric IL_4WSM_372 IL_16315.2 | |
| IL_9WW5_241 | 1/BA/1347:1349, 1/BA/1380:1382 | Isolated cWH basepair | homologous IL_9H3G_223 IL_10892.5 | |
| IL_9WW5_242 | 1/BA/1363:1365, 1/BA/1374:1375 | Minor groove platform | homologous IL_9PN5_211 IL_37129.1 | |
| IL_9WW5_249 | 1/BA/1541:1558, 1/BA/1577:1592 | No text annotation | ||
| IL_9WW5_251 | 1/BA/1604:1610, 1/BA/1629:1635 | No text annotation | ||
| IL_9WW5_252 | 1/BA/1700:1702, 1/BA/1833:1836 | No text annotation | homologous IL_9SUM_216 IL_18228.4 | |
| IL_9WW5_253 | 1/BA/1702:1705, 1/BA/1829:1833 | No text annotation | homologous IL_9SUM_217 IL_25873.5 | |
| IL_9WW5_254 | 1/BA/1706:1708, 1/BA/1826:1828 | Isolated non-canonical cWW pair | homologous IL_9H3G_235 IL_01003.7 | |
| IL_9WW5_255 | 1/BA/1708:1711, 1/BA/1822:1826 | No text annotation | homologous IL_9PN5_223 IL_37443.2 | |
| IL_9WW5_256 | 1/BA/1714:1716, 1/BA/1817:1819 | Isolated non-canonical cWW pair | homologous IL_9PN5_224 IL_01003.7 | |
| IL_9WW5_257 | 1/BA/1717:1720, 1/BA/1813:1816 | No text annotation | homologous IL_9SUM_221 IL_58355.5 | |
| IL_9WW5_258 | 1/BA/1720:1723, 1/BA/1811:1813 | Isolated cWH basepair | geometric IL_8GLP_157 IL_10892.5 | |
| IL_9WW5_260 | 1/BA/1729:1731, 1/BA/1803:1805 | No text annotation | homologous IL_9SUM_223 IL_81485.1 | |
| IL_9WW5_261 | 1/BA/1733:1736, 1/BA/1798:1801 | No text annotation | homologous IL_9SUM_224 IL_58355.5 | |
| IL_9WW5_262 | 1/BA/1739:1741, 1/BA/1793:1795 | Isolated non-canonical cWW pair | geometric IL_9AXU_042 IL_01003.7 | |
| IL_9WW5_263 | 1/BA/1742:1746, 1/BA/1788:1792 | No text annotation | homologous IL_9SUM_226 IL_15190.5 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_9WW5_010 | No text annotation | ||
| IL_9WW5_011 | Single stack bend | ||
| IL_9WW5_012 | No text annotation | ||
| IL_9WW5_021 | Single bulged C | ||
| IL_9WW5_024 | No text annotation | ||
| IL_9WW5_026 | No text annotation | ||
| IL_9WW5_027 | Single stack bend | ||
| IL_9WW5_028 | No text annotation | ||
| IL_9WW5_029 | No text annotation | ||
| IL_9WW5_030 | Single bulged A | ||
| IL_9WW5_038 | Single stack bend | ||
| IL_9WW5_042 | Single bulged C | ||
| IL_9WW5_043 | Isolated non-canonical cWW pair | ||
| IL_9WW5_071 | No text annotation | ||
| IL_9WW5_106 | No text annotation | ||
| IL_9WW5_122 | No text annotation | ||
| IL_9WW5_156 | No text annotation | ||
| IL_9WW5_175 | Minor groove platform | ||
| IL_9WW5_176 | No text annotation | ||
| IL_9WW5_177 | No text annotation | ||
| IL_9WW5_182 | No text annotation | ||
| IL_9WW5_183 | No text annotation | ||
| IL_9WW5_184 | Double sheared with non-canonical cWW | ||
| IL_9WW5_185 | No text annotation | ||
| IL_9WW5_186 | No text annotation | ||
| IL_9WW5_187 | Single bulged A | ||
| IL_9WW5_188 | No text annotation | ||
| IL_9WW5_193 | No text annotation | ||
| IL_9WW5_194 | Single bulged G | ||
| IL_9WW5_195 | No text annotation | ||
| IL_9WW5_196 | No text annotation | ||
| IL_9WW5_197 | No text annotation | ||
| IL_9WW5_199 | Tandem non-canonical cWW pairs | ||
| IL_9WW5_201 | Single bulged U | ||
| IL_9WW5_208 | Isolated non-canonical cWW pair | ||
| IL_9WW5_210 | No text annotation | ||
| IL_9WW5_212 | No text annotation | ||
| IL_9WW5_219 | No text annotation | ||
| IL_9WW5_230 | Single stack bend | ||
| IL_9WW5_232 | No text annotation | ||
| IL_9WW5_233 | No text annotation | ||
| IL_9WW5_234 | No text annotation | ||
| IL_9WW5_235 | No text annotation | ||
| IL_9WW5_236 | No text annotation | ||
| IL_9WW5_237 | No text annotation | ||
| IL_9WW5_238 | Single bulged U | ||
| IL_9WW5_239 | No text annotation | ||
| IL_9WW5_240 | No text annotation | ||
| IL_9WW5_243 | No text annotation | ||
| IL_9WW5_244 | No text annotation | ||
| IL_9WW5_245 | No text annotation | ||
| IL_9WW5_246 | Single bulged G | ||
| IL_9WW5_247 | Single stack bend | ||
| IL_9WW5_248 | No text annotation | ||
| IL_9WW5_250 | No text annotation | ||
| IL_9WW5_259 | No text annotation | ||
| IL_9WW5_264 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_9WW5_001 | 1/AA/112:116, 1/AA/155:160, 1/AA/275:278 | No text annotation | homologous J3_8GLP_001 NA | |
| J3_9WW5_002 | 1/AA/351:367, 1/AA/374:379, 1/AC/21:24 | No text annotation | homologous J3_8GLP_024 J3_07616.4 | |
| J3_9WW5_003 | 1/AA/380:387, 1/AA/414:415, 1/AC/19:20 | No text annotation | geometric J3_8GLP_025 J3_68715.4 | |
| J3_9WW5_004 | 1/AA/380:390, 1/AA/401:415, 1/AC/19:20 | No text annotation | homologous J3_8GLP_026 J3_17917.4 | |
| J3_9WW5_005 | 1/AA/451:455, 1/AA/701:705, 1/AA/1292:1296 | No text annotation | homologous J3_8GLP_027 NA | |
| J3_9WW5_006 | 1/AA/712:713, 1/AA/955:976, 1/AA/1278:1284 | No text annotation | ||
| J3_9WW5_007 | 1/AA/1531:1537, 1/AA/1622:1624, 1/AA/1640:1643 | No text annotation | homologous J3_9AXU_009 J3_46658.4 | |
| J3_9WW5_008 | 1/AA/1546:1548, 1/AA/1580:1584, 1/AA/1609:1612 | No text annotation | homologous J3_9H3G_013 J3_69816.4 | |
| J3_9WW5_009 | 1/AA/1726:1727, 1/AA/1802:1806, 1/AA/1832:1837 | No text annotation | homologous J3_8GLP_029 NA | |
| J3_9WW5_010 | 1/AA/2393:2399, 1/AA/2805:2807, 1/AA/2819:2822 | No text annotation | homologous J3_8GLP_004 J3_05025.4 | |
| J3_9WW5_011 | 1/AA/2402:2405, 1/AA/2785:2791, 1/AA/2800:2802 | No text annotation | homologous J3_8GLP_005 J3_76012.4 | |
| J3_9WW5_012 | 1/AA/2440:2445, 1/AA/2515:2519, 1/AA/2536:2537 | No text annotation | homologous J3_8GLP_030 J3_94309.4 | |
| J3_9WW5_013 | 1/AA/2451:2456, 1/AA/2465:2476, 1/AA/2501:2508 | No text annotation | homologous J3_8GLP_031 J3_53783.2 | |
| J3_9WW5_014 | 1/AA/2551:2555, 1/AA/2572:2575, 1/AA/2757:2767 | No text annotation | homologous J3_8GLP_006 NA | |
| J3_9WW5_015 | 1/AA/2575:2576, 1/AA/2585:2589, 1/AA/2756:2757 | No text annotation | homologous J3_8GLP_032 J3_05348.4 | |
| J3_9WW5_016 | 1/AA/2598:2602, 1/AA/2737:2738, 1/AA/2742:2747 | No text annotation | homologous J3_9H3G_020 J3_08594.4 | |
| J3_9WW5_017 | 1/AA/3937:3939, 1/AA/4074:4078, 1/AA/4168:4173 | No text annotation | homologous J3_8GLP_007 J3_17460.1 | |
| J3_9WW5_018 | 1/AA/4228:4230, 1/AA/4331:4342, 1/AA/4370:4375 | No text annotation | homologous J3_8GLP_034 J3_04772.4 | |
| J3_9WW5_019 | 1/AA/4241:4243, 1/AA/4267:4269, 1/AA/4278:4283 | No text annotation | homologous J3_8GLP_009 J3_05327.4 | |
| J3_9WW5_020 | 1/AA/4463:4466, 1/AA/4491:4493, 1/AA/4507:4513 | No text annotation | homologous J3_9H3G_024 J3_44047.4 | |
| J3_9WW5_021 | 1/AA/4751:4754, 1/AA/4879:4883, 1/AA/4936:4948 | No text annotation | homologous J3_8GLP_036 NA | |
| J3_9WW5_022 | 1/AA/4970:4972, 1/AA/4986:4991, 1/AA/5060:5063 | No text annotation | homologous J3_8GLP_037 NA | |
| J3_9WW5_023 | 1/AB/9:14, 1/AB/65:66, 1/AB/109:110 | No text annotation | homologous J3_8QYX_024 J3_26985.4 | |
| J3_9WW5_024 | 1/AC/44:45, 1/AC/58:64, 1/AC/95:99 | No text annotation | homologous J3_8GLP_039 J3_01004.4 | |
| J3_9WW5_025 | 1/BA/40:41, 1/BA/481:489, 1/BA/511:514 | No text annotation | ||
| J3_9WW5_026 | 1/BA/682:684, 1/BA/918:922, 1/BA/1022:1023 | No text annotation | geometric J3_9H3G_030 J3_01633.3 | |
| J3_9WW5_027 | 1/BA/682:684, 1/BA/918:923, 1/BA/1019:1023 | No text annotation | homologous J3_9H3G_031 J3_17385.8 | |
| J3_9WW5_028 | 1/BA/816:819, 1/BA/829:831, 1/BA/843:848 | No text annotation | homologous J3_9SUM_029 J3_97642.5 | |
| J3_9WW5_029 | 1/BA/938:941, 1/BA/985:993, 1/BA/1000:1004 | No text annotation | homologous J3_9H3G_033 NA | |
| J3_9WW5_030 | 1/BA/1094:1096, 1/BA/1136:1140, 1/BA/1147:1151 | No text annotation | homologous J3_9H3G_034 NA | |
| J3_9WW5_035 | 1/BA/1340:1345, 1/BA/1384:1389, 1/BA/1481:1486 | No text annotation | homologous J3_9PN5_039 NA | |
| J3_9WW5_036 | 1/BA/1350:1351, 1/BA/1360:1363, 1/BA/1375:1379 | No text annotation | homologous J3_9SUM_037 J3_76043.7 | |
| J3_9WW5_037 | 1/BA/1391:1395, 1/BA/1450:1456, 1/BA/1470:1479 | No text annotation | ||
| J3_9WW5_038 | 1/BA/1532:1536, 1/BA/1597:1604, 1/BA/1635:1638 | No text annotation | homologous J3_9PN5_043 J3_03192.4 | |
| J4_9WW5_001 | 1/AA/111:112, 1/AA/278:283, 1/AA/304:310, 1/AA/327:330 | No text annotation | homologous J4_8GLP_001 J4_94698.4 | |
| J4_9WW5_002 | 1/AA/196:199, 1/AA/215:222, 1/AA/226:228, 1/AA/240:244 | No text annotation | homologous J4_8GLP_002 NA | |
| J4_9WW5_003 | 1/AA/981:984, 1/AA/1070:1072, 1/AA/1240:1244, 1/AA/1267:1273 | No text annotation | ||
| J4_9WW5_004 | 1/AA/2365:2371, 1/AA/2389:2391, 1/AA/2824:2829, 1/AA/3856:3857 | No text annotation | homologous J4_8GLP_004 NA | |
| J4_9WW5_005 | 1/AA/2406:2410, 1/AA/2434:2439, 1/AA/2538:2539, 1/AA/2777:2784 | No text annotation | ||
| J4_9WW5_006 | 1/AA/2409:2410, 1/AA/2434:2439, 1/AA/2538:2539, 1/AA/2777:2783 | No text annotation | homologous J4_8GLP_006 J4_48150.2 | |
| J4_9WW5_007 | 1/AA/2618:2619, 1/AA/2637:2642, 1/AA/2692:2698, 1/AA/2718:2719 | No text annotation | homologous J4_8GLP_008 NA | |
| J4_9WW5_008 | 1/AA/3634:3638, 1/AA/3650:3654, 1/AA/3690:3694, 1/AA/3821:3826 | No text annotation | homologous J4_8GLP_009 J4_78485.4 | |
| J4_9WW5_009 | 1/AA/3696:3698, 1/AA/3752:3753, 1/AA/3771:3780, 1/AA/3814:3819 | No text annotation | homologous J4_9H3G_008 J4_42306.3 | |
| J4_9WW5_010 | 1/AA/4231:4235, 1/AA/4289:4291, 1/AA/4318:4319, 1/AA/4328:4330 | No text annotation | ||
| J4_9WW5_011 | 1/AA/4231:4235, 1/AA/4289:4293, 1/AA/4317:4319, 1/AA/4328:4330 | No text annotation | homologous J4_9SUM_009 J4_59590.4 | |
| J4_9WW5_012 | 1/AA/4587:4590, 1/AA/4620:4621, 1/AA/4676:4678, 1/AA/4712:4715 | No text annotation | homologous J4_8GLP_013 J4_69783.1 | |
| J4_9WW5_013 | 1/BA/98:106, 1/BA/355:357, 1/BA/405:409, 1/BA/431:432 | No text annotation | homologous J4_9H3G_013 J4_15241.5 | |
| J4_9WW5_014 | 1/BA/671:673, 1/BA/1032:1037, 1/BA/1078:1089, 1/BA/1160:1161 | No text annotation | homologous J4_9H3G_014 J4_14595.4 | |
| J5_9WW5_001 | 1/AA/20:21, 1/AC/35:42, 1/AC/101:106, 1/AC/113:114, 1/AC/136:137 | No text annotation | ||
| J5_9WW5_002 | 1/AA/1335:1340, 1/AA/1516:1519, 1/AA/1658:1661, 1/AA/2288:2290, 1/AA/2345:2351 | No text annotation | homologous J5_8GLP_002 J5_08384.4 | |
| J5_9WW5_003 | 1/AA/2855:2863, 1/AA/2887:2888, 1/AA/3613:3614, 1/AA/3618:3626, 1/AA/3835:3837 | No text annotation | homologous J5_8GLP_003 J5_99177.4 | |
| J5_9WW5_004 | 1/AA/3903:3910, 1/AA/4392:4400, 1/AA/4444:4453, 1/AA/4528:4534, 1/AA/4552:4557 | No text annotation | ||
| J5_9WW5_005 | 1/AA/3920:3923, 1/AA/4188:4191, 1/AA/4204:4205, 1/AA/4227:4228, 1/AA/4375:4381 | No text annotation | homologous J5_9H3G_006 J5_96125.4 | |
| J5_9WW5_006 | 1/BA/30:36, 1/BA/519:527, 1/BA/558:563, 1/BA/592:596, 1/BA/640:644 | No text annotation | ||
| J5_9WW5_007 | 1/BA/30:36, 1/BA/519:527, 1/BA/558:565, 1/BA/585:596, 1/BA/640:644 | No text annotation | ||
| J5_9WW5_008 | 1/BA/53:56, 1/BA/89:96, 1/BA/434:436, 1/BA/457:459, 1/BA/470:474 | No text annotation | homologous J5_9H3G_009 J5_58574.4 | |
| J6_9WW5_001 | 1/AA/21:26, 1/AA/57:67, 1/AA/74:78, 1/AA/105:109, 1/AA/332:339, 1/AC/33:35 | No text annotation | ||
| J6_9WW5_002 | 1/AA/1352:1355, 1/AA/1384:1388, 1/AA/1395:1399, 1/AA/1418:1421, 1/AA/1464:1466, 1/AA/1499:1504 | No text annotation | homologous J6_8GLP_002 NA | |
| J6_9WW5_003 | 1/AA/3920:3923, 1/AA/4188:4191, 1/AA/4204:4205, 1/AA/4227:4230, 1/AA/4331:4342, 1/AA/4370:4381 | No text annotation | ||
| J7_9WW5_001 | 1/AA/1666:1671, 1/AA/1684:1685, 1/AA/1852:1855, 1/AA/1879:1884, 1/AA/1895:1899, 1/AA/2077:2078, 1/AA/2278:2283 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_9WW5_031 | No text annotation | ||
| J3_9WW5_032 | No text annotation | ||
| J3_9WW5_033 | No text annotation | ||
| J3_9WW5_034 | No text annotation | ||
| J5_9WW5_009 | No text annotation |
Coloring options: