HL_9WW5_087

3D structure

PDB id

9WW5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 80S ribosome rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

CAU(OMC)CAAGG(A2M)AG

Length

12 nucleotides

Bulged bases

9WW5|1|BA|A|464, 9WW5|1|BA|A|469

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WW5|1|BA|C|459
9WW5|1|BA|A|460
9WW5|1|BA|U|461
9WW5|1|BA|OMC|462
9WW5|1|BA|C|463
9WW5|1|BA|A|464
9WW5|1|BA|A|465
9WW5|1|BA|G|466
9WW5|1|BA|G|467
9WW5|1|BA|A2M|468
9WW5|1|BA|A|469
9WW5|1|BA|G|470

Current chains

Chain BA

18S rRNA (1740-MER)

Nearby chains

Chain AX

60S ribosomal protein L23

Chain BW

40S ribosomal protein S6