HL_9WW5_106

3D structure

PDB id

9WW5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 80S ribosome rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

CGUUCAG

Length

7 nucleotides

Bulged bases

9WW5|1|BA|A|1465

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WW5|1|BA|C|1460
9WW5|1|BA|G|1461
9WW5|1|BA|U|1462
9WW5|1|BA|U|1463
9WW5|1|BA|C|1464
9WW5|1|BA|A|1465
9WW5|1|BA|G|1466

Current chains

Chain BA

18S rRNA (1740-MER)

Nearby chains

Chain BC

Small ribosomal subunit protein uS2

Chain BS

40S ribosomal protein S28

Chain Bh

40S ribosomal protein S17