HL_9XFK_053
3D structure
- PDB id
- 9XFK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of bacterial 50S ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- CUAAAGAGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 9XFK|1|I|A|2268, 9XFK|1|I|C|2275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9XFK_053 not in the Motif Atlas
- Homologous match to HL_7A0S_053
- Geometric discrepancy: 0.1176
- The information below is about HL_7A0S_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.2
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
9XFK|1|I|C|2264
9XFK|1|I|U|2265
9XFK|1|I|A|2266
9XFK|1|I|A|2267
9XFK|1|I|A|2268
9XFK|1|I|G|2269
9XFK|1|I|A|2270
9XFK|1|I|G|2271
9XFK|1|I|U|2272
9XFK|1|I|A|2273
9XFK|1|I|A|2274
9XFK|1|I|C|2275
9XFK|1|I|G|2276
Current chains
- Chain I
- 23S rRNA
Nearby chains
- Chain U
- Large ribosomal subunit protein uL16
- Chain e
- 50S ribosomal protein L27
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