HL_9XTC_009

3D structure

PDB id

9XTC (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli delta lepA 30S ribosomal subunit class C, body domain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

9XTC|1|A|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9XTC_009 not in the Motif Atlas

Homologous match to HL_6CZR_080

Geometric discrepancy: 0.1373

The information below is about HL_6CZR_080

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

58

Unit IDs

9XTC|1|A|C|342
9XTC|1|A|U|343
9XTC|1|A|A|344
9XTC|1|A|C|345
9XTC|1|A|G|346
9XTC|1|A|G|347

Current chains

Chain A

RNA (1176-MER)

Nearby chains