HL_9XTE_022

3D structure

PDB id

9XTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli delta lepA 30S ribosomal subunit class A, body domain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.24 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

9XTE|1|A|G|1094

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9XTE_022 not in the Motif Atlas

Homologous match to HL_6CZR_096

Geometric discrepancy: 0.2155

The information below is about HL_6CZR_096

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

24

Unit IDs

9XTE|1|A|G|1089
9XTE|1|A|U|1090
9XTE|1|A|U|1091
9XTE|1|A|A|1092
9XTE|1|A|A|1093
9XTE|1|A|G|1094
9XTE|1|A|U|1095
9XTE|1|A|C|1096

Current chains

Chain A

RNA (1026-MER)

Nearby chains

Chain B

30S ribosomal protein S2